RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TBX3O15119 743 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 SREBF1P36956 1147 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 SLC1A1P43005 524 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 ARHGAP8P85298 464 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 TXNRD3NBQ6F5E7 133 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 LCA5Q86VQ0 697 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 TDRPQ86YL5 185 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 PPP2R3CQ969Q6 453 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 AGBL1Q96MI9 1066 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 NAV1Q8NEY1 1877 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 ATRNL1Q5VV63 1379 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 TCRBV7S3A2A0A539 114 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 DENND3A2RUS2 1198 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 CYB561D2O14569 222 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 ALOX15BO15296 676 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 MAGEB3O15480 346 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 ARP10275 920 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 PEX2P28328 305 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 PEX3P56589 373 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 FAAP100Q0VG06 881 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 NFIAQ12857 509 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 PEX6Q13608 980 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 GRAMD1BQ3KR37 738 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 SLC10A5Q5PT55 438 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 SESTD1Q86VW0 696 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 TMPRSS6Q8IU80 811 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 BANPQ8N9N5 519 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 OR6Y1Q8NGX8 325 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 UNC45AQ9H3U1 944 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 COMMD3-BMI1R4GMX3 469 aa15.6■□□□□ 0.09
CLCN1-201ENST00000343257 A8MXQ7 604 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 PROSCO94903 275 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 SERPINB6P35237 376 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 TMPRSS15P98073 1019 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 PDE1BQ01064 536 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 MMEL1Q495T6 779 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 RALGPS1Q5JS13 557 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 CCDC174Q6PII3 467 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 ZCCHC23Q6ZST2 131 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 NACC1Q96RE7 527 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 STK32BQ9NY57 414 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 ZSCAN9O15535 394 aaPredicted RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 AQP5P55064 265 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 RPL7AP62424 266 aaKnown RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 MAP7Q14244 749 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 CTAGE3PQ8IX95 158 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 ZNF513Q8N8E2 541 aaPredicted RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 CEP70Q8NHQ1 597 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 IQCGQ9H095 443 aaKnown RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 DDX43Q9NXZ2 648 aaKnown RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 IKBKGQ9Y6K9 419 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 SPDYE16A6NNV3 312 aaPredicted RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 ITGA2BP08514 1039 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 TRIP10Q15642 601 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 PAOXQ6QHF9 649 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 RBM44Q6ZP01 1051 aaKnown RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 CDHR3Q6ZTQ4 885 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 ZNF398Q8TD17 642 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.59■□□□□ 0.09
CLCN1-201ENST00000343257 SLC24A2Q9UI40 661 aa15.59■□□□□ 0.09
CLCN1-201ENST00000343257 PHLPP1O60346 1717 aa15.58■□□□□ 0.09
CLCN1-201ENST00000343257 ASLP04424 464 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 C6orf222P0C671 652 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 DSG3P32926 999 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 GALK1P51570 392 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 PRELPP51888 382 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 GDF10P55107 478 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 PTK7Q13308 1070 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 PRKD1Q15139 912 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 SNRNP35Q16560 246 aaKnown RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 NFIL3Q16649 462 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 EFHC2Q5JST6 749 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 ACBD5Q5T8D3 534 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 RNASEH2BQ5TBB1 312 aaKnown RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 MYLK4Q86YV6 388 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 NME8Q8N427 588 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 OLFM3Q96PB7 478 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 ACCSQ96QU6 501 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 EBF4Q9BQW3 602 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 RAB20Q9NX57 234 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 HSFX1Q9UBD0 423 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 ADAMTS6Q9UKP5 1117 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 CRABP2P29373 138 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 MAGEA10P43363 369 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 ACTR3P61158 418 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 HSF5Q4G112 596 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 KRT39Q6A163 491 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 RNF111Q6ZNA4 994 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 HAUS6Q7Z4H7 955 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 RELL1Q8IUW5 271 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.58■□□□□ 0.08
CLCN1-201ENST00000343257 GDPD5Q8WTR4 605 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 ZNF577Q9BSK1 485 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 NYXQ9GZU5 481 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 GLT8D2Q9H1C3 349 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms