RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 ASTE1Q2TB18 679 aaPredicted RBP21.96■■□□□ 1.11
SNX21-201ENST00000342644 KIAA1841Q6NSI8 718 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 CCDC170Q8IYT3 715 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 VPS52Q8N1B4 723 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 TFAP2BQ92481 460 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 B3GALT6Q96L58 329 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 PKMYT1Q99640 499 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 AGPAT1Q99943 283 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 ZBP1Q9H171 429 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 NHEJ1Q9H9Q4 299 aaPredicted RBP21.96■■□□□ 1.11
SNX21-201ENST00000342644 MTRRQ9UBK8 725 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 PCDHGC3Q9UN70 934 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 SSX2IPQ9Y2D8 614 aa21.96■■□□□ 1.11
SNX21-201ENST00000342644 LAMA2P24043 3122 aaKnown RBP21.95■■□□□ 1.11
SNX21-201ENST00000342644 THAP12O43422 761 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 MED7O43513 233 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 PLEKP08567 350 aaPredicted RBP21.95■■□□□ 1.1
SNX21-201ENST00000342644 CTSAP10619 480 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 CD19P15391 556 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 ACAT1P24752 427 aaKnown RBP21.95■■□□□ 1.1
SNX21-201ENST00000342644 BMS1Q14692 1282 aaKnown RBP21.95■■□□□ 1.1
SNX21-201ENST00000342644 MAPRE1Q15691 268 aaKnown RBP21.95■■□□□ 1.1
SNX21-201ENST00000342644 CTXN3Q4LDR2 81 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 VPS36Q86VN1 386 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 GPIHBP1Q8IV16 184 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 C12orf29Q8N999 325 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 OLIG1Q8TAK6 271 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 MYCBPAPQ8TBZ2 947 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 SPPL3Q8TCT6 385 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 ZSWIM1Q9BR11 485 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 ZCWPW1Q9H0M4 648 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 CRTAC1Q9NQ79 661 aa21.95■■□□□ 1.1
SNX21-201ENST00000342644 O00370 1275 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 LILRB3O75022 631 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 URODP06132 367 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 CHRNB2P17787 502 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 BRD2P25440 801 aaKnown RBP21.94■■□□□ 1.1
SNX21-201ENST00000342644 EIF4A3P38919 411 aaKnown RBP21.94■■□□□ 1.1
SNX21-201ENST00000342644 SLC8B1Q6J4K2 584 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 LCLAT1Q6UWP7 414 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 SLC20A1Q8WUM9 679 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 RIN2Q8WYP3 895 aaPredicted RBP21.94■■□□□ 1.1
SNX21-201ENST00000342644 CYFIP2Q96F07 1278 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 CCDC42Q96M95 316 aa21.94■■□□□ 1.1
SNX21-201ENST00000342644 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.94■■□□□ 1.1
SNX21-201ENST00000342644 MYBPHLA2RUH7 354 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 ARHGAP6O43182 974 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 ATP2C2O75185 946 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 PSMC1P62191 440 aaKnown RBP21.93■■□□□ 1.1
SNX21-201ENST00000342644 FMO1Q01740 532 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 PSMD5Q16401 504 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 PPP1R26Q5T8A7 1209 aaPredicted RBP21.93■■□□□ 1.1
SNX21-201ENST00000342644 TRIM72Q6ZMU5 477 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 DCP1BQ8IZD4 617 aaKnown RBP21.93■■□□□ 1.1
SNX21-201ENST00000342644 SLC30A5Q8TAD4 765 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 HNRNPABQ99729 332 aaKnown RBP21.93■■□□□ 1.1
SNX21-201ENST00000342644 NKX2-4Q9H2Z4 354 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.93■■□□□ 1.1
SNX21-201ENST00000342644 IRAK3Q9Y616 596 aa21.93■■□□□ 1.1
SNX21-201ENST00000342644 H3BNC9 293 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 CCP110O43303 1012 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 CALCAP01258 141 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 MMEP08473 750 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 TNFAIP3P21580 790 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 DNAJB2P25686 324 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 CREMQ03060 361 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 SMARCB1Q12824 385 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 NFE2Q16621 373 aaPredicted RBP21.92■■□□□ 1.1
SNX21-201ENST00000342644 LRIT3Q3SXY7 679 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 PPP2R2DQ66LE6 453 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 PRSS55Q6UWB4 352 aaPredicted RBP21.92■■□□□ 1.1
SNX21-201ENST00000342644 SPRED2Q7Z698 418 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 FBXO22Q8NEZ5 403 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 LHX5Q9H2C1 402 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 DEF6Q9H4E7 631 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 SLC28A3Q9HAS3 691 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 RXFP1Q9HBX9 757 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 MRPL17Q9NRX2 175 aaKnown RBP21.92■■□□□ 1.1
SNX21-201ENST00000342644 FNIP2Q9P278 1114 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 GTF3C4Q9UKN8 822 aa21.92■■□□□ 1.1
SNX21-201ENST00000342644 CYLC1P35663 651 aaPredicted RBP21.91■■□□□ 1.1
SNX21-201ENST00000342644 GPR17Q13304 367 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 SLC18A3Q16572 532 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 MDH1BQ5I0G3 518 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 LRRTM3Q86VH5 581 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 FUKQ8N0W3 1084 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 POF1BQ8WVV4 589 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 PCED1BQ96HM7 432 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 TMEM209Q96SK2 561 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 ALG13Q9NP73 1137 aaKnown RBP21.91■■□□□ 1.1
SNX21-201ENST00000342644 ADAMTS1Q9UHI8 967 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 TSPAN16Q9UKR8 245 aa21.91■■□□□ 1.1
SNX21-201ENST00000342644 EPN1Q9Y6I3 576 aaPredicted RBP21.91■■□□□ 1.1
SNX21-201ENST00000342644 SOWAHDA6NJG2 315 aa21.9■■□□□ 1.1
SNX21-201ENST00000342644 DDX3XO00571 662 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNX21-201ENST00000342644 LCA5LO95447 670 aa21.9■■□□□ 1.1
SNX21-201ENST00000342644 CYP1A1P04798 512 aaPredicted RBP21.9■■□□□ 1.1
SNX21-201ENST00000342644 CDH5P33151 784 aaPredicted RBP21.9■■□□□ 1.1
SNX21-201ENST00000342644 KIF11P52732 1056 aa21.9■■□□□ 1.1
SNX21-201ENST00000342644 PTPN14Q15678 1187 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms