RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 PHF2O75151 1096 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 ITGBL1O95965 494 aaPredicted RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 HADHBP55084 474 aaKnown RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 THEMIS2Q5TEJ8 643 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 RSRC1Q96IZ7 334 aaKnown RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 FMO2Q99518 471 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 C10orf88Q9H8K7 445 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 SAE1Q9UBE0 346 aaPredicted RBP11.72□□□□□ -0.53
TRIM29-201ENST00000341846 CACNG4Q9UBN1 327 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 ASIC3Q9UHC3 531 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 PCSK1NQ9UHG2 260 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
TRIM29-201ENST00000341846 TREHO43280 583 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 RGS7P49802 495 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 MTM1Q13496 603 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 TLDC1Q6P9B6 456 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 ZNF677Q86XU0 584 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 IQCKQ8N0W5 287 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 WHAMMQ8TF30 809 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 ACAP3Q96P50 834 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 ZIC5Q96T25 663 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 ADPGKQ9BRR6 497 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 A0A0G2JMZ2 1700 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 B4GALT4O60513 344 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 PROSCO94903 275 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 CYP2C9P11712 490 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 MMP8P22894 467 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 RFC1P35251 1148 aaPredicted RBP11.71□□□□□ -0.53
TRIM29-201ENST00000341846 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
TRIM29-201ENST00000341846 CUL1Q13616 776 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 QPCTQ16769 361 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 PTPN20Q4JDL3 420 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 HIBCHQ6NVY1 386 aaPredicted RBP11.71□□□□□ -0.53
TRIM29-201ENST00000341846 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 FEZF2Q8TBJ5 459 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 NXF3Q9H4D5 531 aaKnown RBP11.71□□□□□ -0.53
TRIM29-201ENST00000341846 MORF4L1Q9UBU8 362 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.53
TRIM29-201ENST00000341846 MTA2O94776 668 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 SMIM10L2AP0DMW4 78 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 SMIM10L2BP0DMW5 78 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 SLCO1A2P46721 670 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 MCCD1P59942 119 aaPredicted RBP11.71□□□□□ -0.54
TRIM29-201ENST00000341846 PTP4A2Q12974 167 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.54
TRIM29-201ENST00000341846 JOSD2Q8TAC2 188 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.54
TRIM29-201ENST00000341846 FAM81BQ96LP2 452 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 ZMAT2Q96NC0 199 aaKnown RBP11.71□□□□□ -0.54
TRIM29-201ENST00000341846 ELOVL4Q9GZR5 314 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 RAB17Q9H0T7 212 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 GOLGA2P5Q9HBQ8 144 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 MRPL47Q9HD33 250 aaKnown RBP11.71□□□□□ -0.54
TRIM29-201ENST00000341846 PARVAQ9NVD7 372 aa11.71□□□□□ -0.54
TRIM29-201ENST00000341846 M0QYV0 167 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 IFFO1Q0D2I5 559 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 CDO1Q16878 200 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 HP1BP3Q5SSJ5 553 aaPredicted RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 CPXM1Q96SM3 734 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 ETAA1Q9NY74 926 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 LRRD1A4D1F6 860 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 PTGIRP43119 386 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 ZNF132P52740 706 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 RAD23BP54727 409 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 PLCB3Q01970 1234 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 ZNF252P-AS1Q0IIN9 211 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 ALS2CLQ60I27 953 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 SH3GL3Q99963 347 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 SHBGP04278 402 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 CHRNA3P32297 505 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 NDST1P52848 882 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 AP3M2P53677 418 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 KRT17Q04695 432 aa11.7□□□□□ -0.54
TRIM29-201ENST00000341846 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
TRIM29-201ENST00000341846 SURF1Q15526 300 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms