RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 GRAMD1AQ96CP6 724 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 FGD4Q96M96 766 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 ZSWIM1Q9BR11 485 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 GPRC5DQ9NZD1 345 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 CHMP2BQ9UQN3 213 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 ALDH5A1P51649 535 aaPredicted RBP14.16□□□□□ -0.14
TMEM248-201ENST00000341567 QPCTQ16769 361 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 TRIM72Q6ZMU5 477 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 PID1Q7Z2X4 250 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
TMEM248-201ENST00000341567 FEZF2Q8TBJ5 459 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 EXT2Q93063 718 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 Q9H521 79 aa14.16□□□□□ -0.14
TMEM248-201ENST00000341567 PYGMP11217 842 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 FLT3P36888 993 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 RFC5P40937 340 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 WDR75Q8IWA0 830 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 IQCKQ8N0W5 287 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 PDCD6IPQ8WUM4 868 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 DEPDC1BQ8WUY9 529 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 TMEM237Q96Q45 408 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NDE1Q9NXR1 346 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 PRG3Q9Y2Y8 225 aaPredicted RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 LMO7Q8WWI1 1683 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NVLO15381 856 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 PIAS1O75925 651 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 CCNE2O96020 404 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NAMPTP43490 491 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 GCLCP48506 637 aaPredicted RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 CTCFP49711 727 aaPredicted RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 ATXN3P54252 364 aaPredicted RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 ALDH18A1P54886 795 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NR1H3Q13133 447 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 CRYMQ14894 314 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 METTL7BQ6UX53 244 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 THTPAQ9BU02 230 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 TUBB6Q9BUF5 446 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 VPS11Q9H270 941 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 IRAK4Q9NWZ3 460 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 VAV3Q9UKW4 847 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 TLR2O60603 784 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 GPC4O75487 556 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 HMBSP08397 361 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 KCNA3P22001 575 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 SERPINB4P48594 390 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 RPS6KA2Q15349 733 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 MYLK4Q86YV6 388 aaPredicted RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NUDCD3Q8IVD9 361 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 NT5C1AQ9BXI3 368 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 KLC2Q9H0B6 622 aa14.15□□□□□ -0.14
TMEM248-201ENST00000341567 TSR3Q9UJK0 312 aaKnown RBP14.15□□□□□ -0.14
TMEM248-201ENST00000341567 LMNAP02545 664 aaKnown RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 GSTA1P08263 222 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 CYP3A4P08684 503 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 GSTA2P09210 222 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 RPL21P46778 160 aaKnown RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 XRRA1Q6P2D8 792 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 KCNV1Q6PIU1 500 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PRUNE1Q86TP1 453 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ATP11CQ8NB49 1132 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PPP1R36Q96LQ0 422 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PRMT7Q9NVM4 692 aaPredicted RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ZCCHC18P0CG32 403 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 RARGP13631 454 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ROR1Q01973 937 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 TRIM42Q8IWZ5 723 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 CCT6BQ92526 530 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 TTC25Q96NG3 672 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 SH3GL3Q99963 347 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 SAE1Q9UBE0 346 aaPredicted RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PDHXO00330 501 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 GIPC1O14908 333 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 TNFSF9P41273 254 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ATG16L1Q676U5 607 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 AGGF1Q8N302 714 aaeCLIP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 SKA2Q8WVK7 121 aaPredicted RBP14.14□□□□□ -0.15
TMEM248-201ENST00000341567 MRIQ9BWK5 157 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PDGFCQ9NRA1 345 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 CYP3A7-CYP3A51PA0A087WV96 503 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 DCDC2CA8MYV0 355 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 B2RBV5 119 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 GNAT1P11488 350 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 CYP3A7P24462 503 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 KCNJ2P63252 427 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 TMEM121Q9BTD3 319 aa14.14□□□□□ -0.15
TMEM248-201ENST00000341567 TSSK1BQ9BXA7 367 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms