RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 R3HCC1Q9Y3T6 440 aaKnown RBP16.5■□□□□ 0.23
VAPA-201ENST00000340541 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 NUMBLQ9Y6R0 609 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 TRIM49BA6NDI0 452 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 PPP1R3GB7ZBB8 358 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 SOAT2O75908 522 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 TRIM49P0CI25 452 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 TRIM49CP0CI26 452 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 KCNA4P22459 653 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 WARSP23381 471 aaKnown RBP16.49■□□□□ 0.23
VAPA-201ENST00000340541 LMO2P25791 158 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 ATICP31939 592 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 CCR2P41597 374 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 LHX1P48742 406 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 EPHA5P54756 1037 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 STARD6P59095 220 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 PPP3CAQ08209 521 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 SMARCB1Q12824 385 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 BIRC3Q13489 604 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 TRPC3Q13507 836 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 NCOA4Q13772 614 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 WDR72Q3MJ13 1102 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
VAPA-201ENST00000340541 PRSS36Q5K4E3 855 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 INTS8Q75QN2 995 aaKnown RBP16.49■□□□□ 0.23
VAPA-201ENST00000340541 SV2AQ7L0J3 742 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
VAPA-201ENST00000340541 FGF13Q92913 245 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 CORO1BQ9BR76 489 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 MKNK1Q9BUB5 465 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 ARHGEF3Q9NR81 526 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 MYO15AQ9UKN7 3530 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 CA14Q9ULX7 337 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 FAM186AA6NE01 2351 aa16.49■□□□□ 0.23
VAPA-201ENST00000340541 BIN1O00499 593 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 PHACTR2O75167 634 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 TACC1O75410 805 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 MOSPD3O75425 235 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 FAM163BP0C2L3 166 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 ATF6P18850 670 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 CCNE1P24864 410 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 MYL7Q01449 175 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 TSPY1Q01534 308 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 TMC8Q8IU68 726 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 NPAS3Q8IXF0 933 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 DCP1BQ8IZD4 617 aaKnown RBP16.48■□□□□ 0.23
VAPA-201ENST00000340541 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
VAPA-201ENST00000340541 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 TCEAL4Q96EI5 215 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 DHTKD1Q96HY7 919 aaPredicted RBP16.48■□□□□ 0.23
VAPA-201ENST00000340541 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
VAPA-201ENST00000340541 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
VAPA-201ENST00000340541 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
VAPA-201ENST00000340541 PTPRDP23468 1912 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 MYBPHLA2RUH7 354 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 CETN3O15182 167 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 ATP2C2O75185 946 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 HAPLN1P10915 354 aaPredicted RBP16.47■□□□□ 0.23
VAPA-201ENST00000340541 CEBPBP17676 345 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 GCLMP48507 274 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 PFKPQ01813 784 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 PRKCQQ04759 706 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 PLD1Q13393 1074 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 CAMK4Q16566 473 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 ZNF699Q32M78 642 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 PARM1Q6UWI2 310 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 ING5Q8WYH8 240 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 FGF14Q92915 247 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
VAPA-201ENST00000340541 SEPT5Q99719 369 aaPredicted RBP16.47■□□□□ 0.23
VAPA-201ENST00000340541 OSBPL6Q9BZF3 934 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 LMBRD1Q9NUN5 540 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 ABI2Q9NYB9 513 aaPredicted RBP16.47■□□□□ 0.23
VAPA-201ENST00000340541 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 PCDHB5Q9Y5E4 795 aa16.47■□□□□ 0.23
VAPA-201ENST00000340541 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 PSMA7O14818 248 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 MICAL2O94851 1124 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 ASS1P00966 412 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 KRT13P13646 458 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 PCSK1P29120 753 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 ALDH1A3P47895 512 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 EPHB3P54753 998 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 TNNC1P63316 161 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 GPC5P78333 572 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
VAPA-201ENST00000340541 MGAT5BQ3V5L5 792 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
VAPA-201ENST00000340541 TTI2Q6NXR4 508 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms