RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 DYDC1Q8WWB3 177 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 LENG9Q96B70 501 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 MAML3Q96JK9 1138 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 CPVLQ9H3G5 476 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 ARPP21Q9UBL0 812 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-202ENST00000339438 PPM1HQ9ULR3 514 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 ACTL7BQ9Y614 415 aa5.9□□□□□ -1.47
CSDE1-202ENST00000339438 NCANO14594 1321 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 IGKV6D-21A0A0A0MT36 114 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TCP10L2B9ZVM9 353 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DNAJC6O75061 913 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DCTN3O75935 186 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SNAI1O95863 264 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 BRAFP15056 766 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 CDR2Q01850 454 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DNAJC3Q13217 504 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PRPF4BQ13523 1007 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 MYLK3Q32MK0 819 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 HSF5Q4G112 596 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC62Q6P9F0 684 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 ADGRG6Q86SQ4 1221 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 VSIG1Q86XK7 387 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 NPLOC4Q8TAT6 608 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TAF4BQ92750 862 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DYDC2Q96IM9 177 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 VAT1LQ9HCJ6 419 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 HEMK1Q9Y5R4 338 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 A8MXQ7 604 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 GPR25O00155 361 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PLCG1P19174 1290 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DLG1Q12959 904 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 APOFQ13790 326 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PDK4Q16654 411 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SLC44A4Q53GD3 710 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TDRD12Q587J7 1177 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 FAM91A1Q658Y4 838 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 LRRC8BQ6P9F7 803 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 BORAQ6PGQ7 559 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 RBM44Q6ZP01 1051 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 FAM186BQ8IYM0 893 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 ENAHQ8N8S7 591 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 ANKRD42Q8N9B4 389 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PHF12Q96QT6 1004 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SIKE1Q9BRV8 207 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 BLOC1S4Q9NUP1 217 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 ARMCX3Q9UH62 379 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 DIS3Q9Y2L1 958 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TCRBV7S2A1N4TA0A589 114 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SH3PXD2BA1X283 911 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 HNRNPCL1O60812 293 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 USP1O94782 785 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 ZBED1O96006 694 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 CD4P01730 458 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 GOLGA8HP0CJ92 632 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 HOXD11P31277 338 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SERPINB8P50452 374 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PSMD7P51665 324 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PRKG1Q13976 671 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 WTAPQ15007 396 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TCTN1Q2MV58 587 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TRIM71Q2Q1W2 868 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC92Q53HC0 331 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 INTS8Q75QN2 995 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TRMT10CQ7L0Y3 403 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PRUNE1Q86TP1 453 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 NME8Q8N427 588 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 LZTR1Q8N653 840 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 FNBP1Q96RU3 617 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 PLIN2Q99541 437 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 STK33Q9BYT3 514 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 UBA5Q9GZZ9 404 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 STMN4Q9H169 189 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 RC3H2Q9HBD1 1191 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 SIX2Q9NPC8 291 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 UTP6Q9NYH9 597 aaKnown RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 COG5Q9UP83 839 aa5.89□□□□□ -1.47
CSDE1-202ENST00000339438 V9GY48 417 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-202ENST00000339438 TET1Q8NFU7 2136 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CAPN14A8MX76 684 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 FBP2O00757 339 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PRPF4O43172 522 aaKnown RBP eCLIP5.88□□□□□ -1.475e-7■■■■□ 22.3
CSDE1-202ENST00000339438 TYROBPO43914 113 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 CCDC22O60826 627 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PHF2O75151 1096 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 LDHCP07864 332 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 GTF2A2P52657 109 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ACTR3P61158 418 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TFAP4Q01664 338 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 DCTN2Q13561 401 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 SPIDRQ14159 915 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 NADK2Q4G0N4 442 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
CSDE1-202ENST00000339438 TRIM67Q6ZTA4 783 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 PEX26Q7Z412 305 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 MAP7D3Q8IWC1 876 aa5.88□□□□□ -1.47
CSDE1-202ENST00000339438 ZNF444Q8N0Y2 327 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms