RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KPNA7A9QM74 516 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 FAM153BP0C7A2 387 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 GHRP10912 638 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 HOXD10P28358 340 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 CD52P31358 61 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 RFC1P35251 1148 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 APLP1P51693 650 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 PDCLQ13371 301 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 ITGA7Q13683 1181 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 FAM153CQ494X1 144 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 PPP1R26Q5T8A7 1209 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 REM2Q8IYK8 340 aaPredicted RBP23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 PCSK9Q8NBP7 692 aaKnown RBP23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 CCDC26Q8TAB7 109 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 JOSD2Q8TAC2 188 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 HERPUD2Q9BSE4 406 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 FAM153AQ9UHL3 310 aa23.72■■□□□ 1.39
PDLIM2-203ENST00000339162 PDGFRBP09619 1106 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 RARAP10276 462 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 ATF7P17544 494 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 MLH1P40692 756 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 EMC1Q8N766 993 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 STRIP2Q9ULQ0 834 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 NOD1Q9Y239 953 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 FGFR1P11362 822 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 KRT3P12035 628 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 TNFRSF8P28908 595 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 GOLGA7BQ2TAP0 167 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 MAATS1Q7Z4T9 603 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 XYLT1Q86Y38 959 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 CCDC50Q8IVM0 306 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 RHOT1Q8IXI2 618 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 MAGOHBQ96A72 148 aaKnown RBP23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 GAD1Q99259 594 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 TRIM31Q9BZY9 425 aa23.71■■□□□ 1.39
PDLIM2-203ENST00000339162 A8MXQ7 604 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 TULP2O00295 520 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 LMO2P25791 158 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 VEGFBP49765 207 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 CDR1P51861 262 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 ACLYP53396 1101 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 SMC1AQ14683 1233 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 TTC27Q6P3X3 843 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 RNF180Q86T96 592 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 HEMGNQ9BXL5 484 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 METTL5Q9NRN9 209 aaKnown RBP23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 PADI3Q9ULW8 664 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
PDLIM2-203ENST00000339162 XPOTO43592 962 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 RGS7P49802 495 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 EPHB4P54760 987 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 DR1Q01658 176 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 SIX1Q15475 284 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 CLUL1Q15846 466 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 LCLAT1Q6UWP7 414 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 TTC39CQ8N584 583 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 KBTBD7Q8WVZ9 684 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 ACSF2Q96CM8 615 aaPredicted RBP23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 DPH5Q9H2P9 285 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 DAPK3O43293 454 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 PHF2O75151 1096 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 PFKMP08237 780 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 TAF6P49848 677 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 HLTFQ14527 1009 aaKnown RBP eCLIP23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 TXNRD3NBQ6F5E7 133 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 ANKS1BQ7Z6G8 1248 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 RNF169Q8NCN4 708 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 GSTCDQ8NEC7 633 aa23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 PDCD11Q14690 1871 aaKnown RBP23.69■■□□□ 1.38
PDLIM2-203ENST00000339162 PI4K2BG5E9Z4 385 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 MGEA5O60502 916 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 PAK2Q13177 524 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 ZFYVE27Q5T4F4 411 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 SMYD5Q6GMV2 418 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 RNF25Q96BH1 459 aaPredicted RBP23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 ZNF560Q96MR9 790 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 PPP1R10Q96QC0 940 aaKnown RBP23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 CFHR5Q9BXR6 569 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 MIOSQ9NXC5 875 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 SIGLEC16A6NMB1 481 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 GPR182O15218 404 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 PSTPIP1O43586 416 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 MAN1A1P33908 653 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 KCNJ1P48048 391 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 LILRA4P59901 499 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 RPAINQ86UA6 219 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 TTC30AQ86WT1 665 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 C1orf54Q8WWF1 131 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 PLVAPQ9BX97 442 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 KIAA1257Q9ULG3 409 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 HPCAL4Q9UM19 191 aa23.68■■□□□ 1.38
PDLIM2-203ENST00000339162 E5RJQ4 531 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 H3BQF6 201 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 INHAP05111 366 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 RALAP11233 206 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 HSPA6P17066 643 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 CCDC137Q6PK04 289 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 PIWIL1Q96J94 861 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms