RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 USP24Q9UPU5 2620 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 FRYQ5TBA9 3013 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 ADRB1P08588 477 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 LRRTM3Q86VH5 581 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 WDR5BQ86VZ2 330 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 FAM160A2Q8N612 972 aaPredicted RBP16.86■□□□□ 0.29
LINC01116-202ENST00000339037 ST6GALNAC4Q9H4F1 302 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 STYXL1Q9Y6J8 313 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 SCN1AP35498 2009 aa16.86■□□□□ 0.29
LINC01116-202ENST00000339037 CHD6Q8TD26 2715 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 KPNA7A9QM74 516 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 EXTL3O43909 919 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 HAPLN1P10915 354 aaPredicted RBP16.85■□□□□ 0.29
LINC01116-202ENST00000339037 FOXK1P85037 733 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 POU5F1Q01860 360 aaKnown RBP16.85■□□□□ 0.29
LINC01116-202ENST00000339037 GRIN1Q05586 938 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 BFSP1Q12934 665 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 SV2CQ496J9 727 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 PPM1JQ5JR12 505 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 DCP1BQ8IZD4 617 aaKnown RBP16.85■□□□□ 0.29
LINC01116-202ENST00000339037 KRI1Q8N9T8 703 aaKnown RBP16.85■□□□□ 0.29
LINC01116-202ENST00000339037 POMGNT1Q8WZA1 660 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 SLC39A7Q92504 469 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 ZNF560Q96MR9 790 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 FAM83CQ9BQN1 747 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 GKN1Q9NS71 199 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
LINC01116-202ENST00000339037 C2orf72A6NCS6 295 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 GDF9O60383 454 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 IL18RAPO95256 599 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 DDX6P26196 483 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01116-202ENST00000339037 HOXC13P31276 330 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 DDIT3P35638 169 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 PNPLA4P41247 253 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 NLRP12P59046 1061 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 TSPY1Q01534 308 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 GRSF1Q12849 480 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01116-202ENST00000339037 RUNX3Q13761 415 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 TMEM196Q5HYL7 178 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 BRAPQ7Z569 592 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 EFCAB13Q8IY85 973 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 MAB21L3Q8N8X9 362 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
LINC01116-202ENST00000339037 EBF3Q9H4W6 596 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 KIF9Q9HAQ2 790 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 TCHHQ07283 1943 aa16.84■□□□□ 0.29
LINC01116-202ENST00000339037 ATG13O75143 517 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 RPP40O75818 363 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 ADSSP30520 456 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 POSTNQ15063 836 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 SF3A1Q15459 793 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 NFE2Q16621 373 aaPredicted RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 TRIM68Q6AZZ1 485 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 PKN3Q6P5Z2 889 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 SFR1Q86XK3 245 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 NT5DC4Q86YG4 428 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 GAB3Q8WWW8 586 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 MRPS31Q92665 395 aaKnown RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 HVCN1Q96D96 273 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 IKZF4Q9H2S9 585 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 TDP1Q9NUW8 608 aa16.83■□□□□ 0.28
LINC01116-202ENST00000339037 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
LINC01116-202ENST00000339037 CCDC163A0A0D9SF12 145 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 OTOL1A6NHN0 477 aaPredicted RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 F11P03951 625 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 TFAMQ00059 246 aaKnown RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 AMPD2Q01433 879 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 AASDHQ4L235 1098 aaPredicted RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 TXNDC8Q6A555 127 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 FSTL4Q6MZW2 842 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 CHFRQ96EP1 664 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 FAM213AQ9BRX8 229 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 TMLHEQ9NVH6 421 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 MAGED2Q9UNF1 606 aaPredicted RBP16.82■□□□□ 0.28
LINC01116-202ENST00000339037 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
LINC01116-202ENST00000339037 RALGAPA1Q6GYQ0 2036 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 SOBPA7XYQ1 873 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 TRDMT1O14717 391 aaKnown RBP16.81■□□□□ 0.28
LINC01116-202ENST00000339037 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
LINC01116-202ENST00000339037 CSH1P0DML2 217 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 CSH2P0DML3 217 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 POLR2BP30876 1174 aaKnown RBP16.81■□□□□ 0.28
LINC01116-202ENST00000339037 GPR15P49685 360 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
LINC01116-202ENST00000339037 DYMQ7RTS9 669 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms