RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MTIF3Q9H2K0 278 aaKnown RBP11.42□□□□□ -0.58
RTN3-201ENST00000338850 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 INTS9Q9NV88 658 aaKnown RBP11.42□□□□□ -0.58
RTN3-201ENST00000338850 SLC12A4Q9UP95 1085 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 TISP43B9A030 160 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 ANKRD63C9JTQ0 380 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 DDX39AO00148 427 aaKnown RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 TTC4O95801 387 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 GH1P01241 217 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 SHBGP04278 402 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 KCNA2P16389 499 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 EIF2AK2P19525 551 aaKnown RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 ICAM3P32942 547 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 CETN2P41208 172 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 COPS2P61201 443 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 TAP1Q03518 808 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 KRT17Q04695 432 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 PTPN11Q06124 597 aaPredicted RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 ARHGAP1Q07960 439 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 STAT4Q14765 748 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 PPP1R7Q15435 360 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 STXBP2Q15833 593 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 CNGA2Q16280 664 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 QPCTQ16769 361 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 PTPROQ16827 1216 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 LY6KQ17RY6 165 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 FAM47CQ5HY64 1035 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 PLEKHA7Q6IQ23 1121 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 SEPT14Q6ZU15 432 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 TDRPQ86YL5 185 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 RHOT1Q8IXI2 618 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 TAS1R2Q8TE23 839 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 GRAMD1AQ96CP6 724 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 FAXDC2Q96IV6 333 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 IFT74Q96LB3 600 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 FRMD8P1Q9BZ68 369 aaPredicted RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 CDC42EP4Q9H3Q1 356 aaKnown RBP11.41□□□□□ -0.58
RTN3-201ENST00000338850 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 EURLQ9NYK6 297 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 SAMD15Q9P1V8 674 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 BCCIPQ9P287 314 aaKnown RBP eCLIP11.41□□□□□ -0.58
RTN3-201ENST00000338850 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 CHD9Q3L8U1 2897 aa11.41□□□□□ -0.58
RTN3-201ENST00000338850 A0A1B0GUA9 196 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 ANKRD65E5RJM6 399 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 CDH16O75309 829 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 LSM8O95777 96 aaKnown RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 C4BPAP04003 597 aaKnown RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 NR3C2P08235 984 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 MMP3P08254 477 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 SKIV2L2P42285 1042 aaKnown RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 NAMPTP43490 491 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 SCTRP47872 440 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 CBLBQ13191 982 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 RAB30Q15771 203 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 XKR3Q5GH77 459 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 SPDYAQ5MJ70 313 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 ARHGEF16Q5VV41 709 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 CRELD2Q6UXH1 353 aaPredicted RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 FUKQ8N0W3 1084 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 UBR7Q8N806 425 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 POMGNT1Q8WZA1 660 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 CCDC114Q96M63 670 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 TTC25Q96NG3 672 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 TMEM134Q9H6X4 195 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 XPNPEP1Q9NQW7 623 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 ANAPC7Q9UJX3 599 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 EFR3BQ9Y2G0 817 aa11.4□□□□□ -0.58
RTN3-201ENST00000338850 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.58
RTN3-201ENST00000338850 SMAPO00193 183 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 HNRNPDLO14979 420 aaKnown RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 MGRN1O60291 552 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 ATG7O95352 703 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 PFKMP08237 780 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 ATF2P15336 505 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 ACO1P21399 889 aaKnown RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 SLC8A1P32418 973 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 CDH5P33151 784 aaPredicted RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 ZNF132P52740 706 aa11.39□□□□□ -0.59
RTN3-201ENST00000338850 GSCP56915 257 aaPredicted RBP11.39□□□□□ -0.59
RTN3-201ENST00000338850 NOMO3P69849 1222 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms