RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 WDR66Q8TBY9 1149 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 NELL2Q99435 816 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 VRK1Q99986 396 aaPredicted RBP3.38□□□□□ -1.87
XRCC4-202ENST00000338635 MACROD1Q9BQ69 325 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 MAN1C1Q9NR34 630 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 DUSP22Q9NRW4 184 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 IPPQ9Y573 584 aa3.38□□□□□ -1.87
XRCC4-202ENST00000338635 PRSS29PA6NIE9 313 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 TRIM75PA6NK02 468 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 E5RJQ4 531 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 SLC16A3O15427 465 aaKnown RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 HTRA2O43464 458 aaPredicted RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 KIF20AO95235 890 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 CHEK2O96017 543 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 MALP21145 153 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 EDNRBP24530 442 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 TOB1P50616 345 aaPredicted RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 SLC16A1P53985 500 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 KLF1Q13351 362 aaPredicted RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 SNAPC2Q13487 334 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 C3orf36Q3SXR2 165 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 KHDC1Q4VXA5 237 aaKnown RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 TREML2Q5T2D2 321 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 PPP4R3AQ6IN85 833 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 KIAA1161Q6NSJ0 714 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 TRIM72Q6ZMU5 477 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 MEPCEQ7L2J0 689 aaKnown RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 MAVSQ7Z434 540 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 NPM2Q86SE8 214 aaKnown RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 CYP2W1Q8TAV3 490 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 KAT5Q92993 513 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 RLIMQ9NVW2 624 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 SIDT1Q9NXL6 827 aaKnown RBP3.37□□□□□ -1.87
XRCC4-202ENST00000338635 CFAP97Q9P2B7 532 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 AGAP1Q9UPQ3 857 aa3.37□□□□□ -1.87
XRCC4-202ENST00000338635 CCDC154A6NI56 674 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 TLR5O60602 858 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 FGBP02675 491 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 GNAI3P08754 354 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 IL6RP08887 468 aaPredicted RBP3.36□□□□□ -1.87
XRCC4-202ENST00000338635 KRT10P13645 584 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 C5AR1P21730 350 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 GCLCP48506 637 aaPredicted RBP3.36□□□□□ -1.87
XRCC4-202ENST00000338635 CLCN2P51788 898 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 PDE1AP54750 535 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 GNAI1P63096 354 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 SPATS2Q86XZ4 545 aaKnown RBP3.36□□□□□ -1.87
XRCC4-202ENST00000338635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.36□□□□□ -1.87
XRCC4-202ENST00000338635 SMRP1Q8NCR6 262 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 C16orf52Q8NHV5 167 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 JADE3Q92613 823 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 RITA1Q96K30 269 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 MARK4Q96L34 752 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 SIK2Q9H0K1 926 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 GPR35Q9HC97 309 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 SLAMF7Q9NQ25 335 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 GNL3LQ9NVN8 582 aaKnown RBP3.36□□□□□ -1.87
XRCC4-202ENST00000338635 KLHL13Q9P2N7 655 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 ADAMTS5Q9UNA0 930 aa3.36□□□□□ -1.87
XRCC4-202ENST00000338635 K7ESF4 209 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 IL1R2P27930 398 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 SMARCA1P28370 1054 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 PHKA1P46020 1223 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 ACAP2Q15057 778 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 ICE2Q659A1 982 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 PGM2L1Q6PCE3 622 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 SHC4Q6S5L8 630 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 TMEM108Q6UXF1 575 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 PARS2Q7L3T8 475 aaKnown RBP3.35□□□□□ -1.87
XRCC4-202ENST00000338635 LRRC71Q8N4P6 559 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 PIGOQ8TEQ8 1089 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 VCPIP1Q96JH7 1222 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 SH2B3Q9UQQ2 575 aa3.35□□□□□ -1.87
XRCC4-202ENST00000338635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 NT5C1B-RDH14C9J2C7 533 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 FCHO1O14526 889 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 RPLP2P05387 115 aaKnown RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 NPSP0C0P6 89 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 TMEM191BP0C7N4 346 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 SCP2P22307 547 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 ATP5F1P24539 256 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 SP2Q02086 613 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 TCF15Q12870 199 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 GTF2H3Q13889 308 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 BOP1Q14137 746 aaKnown RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 TWIST1Q15672 202 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 RNF219Q5W0B1 726 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 FCRL6Q6DN72 434 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 SFRP4Q6FHJ7 346 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 SLC4A10Q6U841 1118 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 USP37Q86T82 979 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 COQ8BQ96D53 544 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 DAZAP1Q96EP5 407 aaKnown RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 ZC3H10Q96K80 434 aaKnown RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 FSD1LQ9BXM9 530 aa3.34□□□□□ -1.87
XRCC4-202ENST00000338635 TINAGL1Q9GZM7 467 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-202ENST00000338635 FAM90A10PA6NDY2 464 aa3.34□□□□□ -1.88
XRCC4-202ENST00000338635 SERINC4A6NH21 518 aa3.34□□□□□ -1.88
XRCC4-202ENST00000338635 POC1B-GALNT4F8VUJ3 575 aa3.34□□□□□ -1.88
XRCC4-202ENST00000338635 FESP07332 822 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms