RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MMGT1Q8N4V1 131 aa12.25□□□□□ -0.45
SHANK2-201ENST00000338508 GLMNQ92990 594 aa12.25□□□□□ -0.45
SHANK2-201ENST00000338508 AHCYL2Q96HN2 611 aaKnown RBP12.25□□□□□ -0.45
SHANK2-201ENST00000338508 CHST12Q9NRB3 414 aa12.25□□□□□ -0.45
SHANK2-201ENST00000338508 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TEX28O15482 410 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 GH1P01241 217 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 GSSP48637 474 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 DYNC1I2Q13409 638 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TMEM132BQ14DG7 1078 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 CALML6Q8TD86 181 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 RBM15Q96T37 977 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 BARHL2Q9NY43 387 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ENO4A6NNW6 628 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 USP1O94782 785 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ALBP02768 609 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TFE3P19532 575 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SERPINB1P30740 379 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 LIFRP42702 1097 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 EFNA5P52803 228 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 EIF2B5Q13144 721 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SNAPC2Q13487 334 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TYW3Q6IPR3 259 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 CENPLQ8N0S6 344 aaPredicted RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SH2D3CQ8N5H7 860 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 FAM71DQ8N9W8 422 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ATP6V1G3Q96LB4 118 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 FOXN1O15353 648 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 POLBP06746 335 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 FNTAP49354 379 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ARF5P84085 180 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SYBUQ9NX95 663 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 FBXL21Q9UKT6 434 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TRIM13O60858 407 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 RNASEH1O60930 286 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 NOS3P29474 1203 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TRIP10Q15642 601 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ENOSF1Q7L5Y1 443 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 GATAD2AQ86YP4 633 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TRPC4APQ8TEL6 797 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SPIRE2Q8WWL2 714 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 GALNT8Q9NY28 637 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SMARCAL1Q9NZC9 954 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 RUVBL2Q9Y230 463 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 PEX1O43933 1283 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ZNF682O95780 498 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 STAU1O95793 577 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 CDC27P30260 824 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 GLRBP48167 497 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 DPP10Q8N608 796 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 SNRNP27Q8WVK2 155 aaKnown RBP12.24□□□□□ -0.45
SHANK2-201ENST00000338508 LY9Q9HBG7 655 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 BLOC1S6Q9UL45 172 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 POLR1DQ9Y2S0 133 aa12.24□□□□□ -0.45
SHANK2-201ENST00000338508 PSMD12O00232 456 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FGFR2P21802 821 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 KCNA3P22001 575 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CNGA2Q16280 664 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ZC2HC1CQ53FD0 456 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TTC39BQ5VTQ0 682 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SLC25A24Q6NUK1 477 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ZNF786Q8N393 782 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ZNF669Q96BR6 464 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CYP2C9P11712 490 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 AKAP5P24588 427 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 RRM2P31350 389 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 OR2W6PQ8NHA6 318 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 RFFLQ8WZ73 363 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TUBGCP3Q96CW5 907 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SH3GL1Q99961 368 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CYP39A1Q9NYL5 469 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CKMP06732 381 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 GTF2H1P32780 548 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 NUDT2P50583 147 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 COG2Q14746 738 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 FOXR1Q6PIV2 292 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TMEM169Q96HH4 297 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 NEUROD4Q9HD90 331 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CPDO75976 1380 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 HNRNPRO43390 633 aaKnown RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CD4P01730 458 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 CSTF3Q12996 717 aaKnown RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 SCARF1Q14162 830 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 DENND5BQ6ZUT9 1274 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 TNIP2Q8NFZ5 429 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-201ENST00000338508 LRRC1Q9BTT6 524 aa12.23□□□□□ -0.45
SHANK2-201ENST00000338508 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms