RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PTGISQ16647 500 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PPIL6Q8IXY8 311 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 HES6Q96HZ4 224 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 KLF6Q99612 283 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 C17orf102A2RUQ5 167 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 EEF2KO00418 725 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 GPC4O75487 556 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF286BP0CG31 522 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ATG16L1Q676U5 607 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CCT6BQ92526 530 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM121Q9BTD3 319 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 KIF13AQ9H1H9 1805 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 A0A0G2JND7 137 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ARHGAP42A6NI28 874 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SMAPO00193 183 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 APOL1O14791 398 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SRLQ86TD4 932 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ZC3H15Q8WU90 426 aaKnown RBP6.6□□□□□ -1.35
PRKDC-202ENST00000338368 CNPY3Q9BT09 278 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 SPDYE5A6NIY4 337 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 OPLAHO14841 1288 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 NAA25Q14CX7 972 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 TFDP3Q5H9I0 405 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 GLB1LQ6UWU2 654 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 VTA1Q9NP79 307 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PAK5Q9P286 719 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 TSPAN16Q9UKR8 245 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 ITGA11Q9UKX5 1188 aa6.6□□□□□ -1.35
PRKDC-202ENST00000338368 PEX10O60683 326 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 MAP3K6O95382 1288 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SERPINB6P35237 376 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 NDST1P52848 882 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF268Q14587 947 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 GJC2Q5T442 439 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 BTBD8Q5XKL5 378 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 NLGN2Q8NFZ4 835 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 KREMEN1Q96MU8 473 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 FAM129AQ9BZQ8 928 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 A0A1B0GUA9 196 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM120BA0PK00 339 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ATP9BO43861 1147 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 KCNA2P16389 499 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF200P98182 395 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SEPT6Q14141 434 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 DCAF6Q58WW2 860 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SERPINB12Q96P63 405 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PCDHB18PQ96TA0 734 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PLEKHA5Q9HAU0 1116 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SNTG2Q9NY99 539 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 CHMP2BQ9UQN3 213 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF536O15090 1300 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 B4GALT5O43286 388 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF449Q6P9G9 518 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 EPAS1Q99814 870 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PCDHA2Q9Y5H9 948 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 GOLGA8RI6L899 631 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 CFAP61Q8NHU2 1237 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 XPNPEP1Q9NQW7 623 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ARHGAP28Q9P2N2 729 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 LACTBL1A8MY62 500 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ARFIP2P53365 341 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ITPRIPL1Q6GPH6 555 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 EIF1ADQ8N9N8 165 aaKnown RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 CARNS1A5YM72 827 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 F8VP50 259 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 ACO1P21399 889 aaKnown RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 HOXD10P28358 340 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 GNL1P36915 607 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 IQSEC1Q6DN90 963 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 C3orf62Q6ZUJ4 267 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 DNAJB3Q8WWF6 145 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 DONSONQ9NYP3 566 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 GGT7Q9UJ14 662 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 MID2Q9UJV3 735 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 GRIK4Q16099 956 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PLCD3Q8N3E9 789 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 RIBC1Q8N443 379 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 MCUQ8NE86 351 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 RAB3IL1Q8TBN0 382 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 FRMD8P1Q9BZ68 369 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PPP1R12CQ9BZL4 782 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PSMC3IPQ9P2W1 217 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 PPP1R12AO14974 1030 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 RPL21P46778 160 aaKnown RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 JADE1Q6IE81 842 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SHCBP1Q8NEM2 672 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 BSNDQ8WZ55 320 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 SEMA4DQ92854 862 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 NTPCRQ9BSD7 190 aaKnown RBP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 TUBB6Q9BUF5 446 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRKDC-202ENST00000338368 DCTN4Q9UJW0 460 aa6.59□□□□□ -1.35
PRKDC-202ENST00000338368 M0QYT0 321 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 DHX15O43143 795 aaKnown RBP6.59□□□□□ -1.36
PRKDC-202ENST00000338368 TRAPPC3O43617 180 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms