RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CALB1P05937 261 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 FAM163BP0C2L3 166 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 ODC1P11926 461 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 RFC2P35250 354 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 AARSP49588 968 aaKnown RBP eCLIP15.57■□□□□ 0.08
CBX3-201ENST00000337620 DNA2P51530 1060 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 DSC1Q08554 894 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 PTP4A2Q12974 167 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 TCEAL1Q15170 157 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 PAPD7Q5XG87 772 aaKnown RBP15.57■□□□□ 0.08
CBX3-201ENST00000337620 CD300LGQ6UXG3 332 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.57■□□□□ 0.082e-6■□□□□ 8.7
CBX3-201ENST00000337620 COLGALT2Q8IYK4 626 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 TMEM86AQ8N2M4 240 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 AVENQ9NQS1 362 aaPredicted RBP15.57■□□□□ 0.08
CBX3-201ENST00000337620 DDX43Q9NXZ2 648 aaKnown RBP15.57■□□□□ 0.08
CBX3-201ENST00000337620 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 DNAJB4Q9UDY4 337 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 PACSIN2Q9UNF0 486 aaPredicted RBP15.57■□□□□ 0.08
CBX3-201ENST00000337620 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
CBX3-201ENST00000337620 TTC3P53804 2025 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 TMEM110-MUSTN1A8MSY1 372 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 GABRDO14764 452 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 HOXA2O43364 376 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 ATP2C2O75185 946 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CCDC130P13994 396 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 GPD2P43304 727 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 LHX1P48742 406 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 HADHBP55084 474 aaKnown RBP15.56■□□□□ 0.08
CBX3-201ENST00000337620 PSMC1P62191 440 aaKnown RBP15.56■□□□□ 0.08
CBX3-201ENST00000337620 AMPD2Q01433 879 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 MESDQ14696 234 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 NPAS4Q8IUM7 802 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 BTBD6Q96KE9 485 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 PSMB7Q99436 277 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 SYNCQ9H7C4 482 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 PRDM10Q9NQV6 1147 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 HESX1Q9UBX0 185 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CDC23Q9UJX2 597 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 PRG3Q9Y2Y8 225 aaPredicted RBP15.56■□□□□ 0.08
CBX3-201ENST00000337620 TBKBP1A7MCY6 615 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CSF2RAP15509 400 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 ADORA2BP29275 332 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 PTPN20Q4JDL3 420 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 PEX26Q7Z412 305 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 SLFN11Q7Z7L1 901 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 METTL23Q86XA0 190 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CRIPAKQ8N1N5 446 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 B3GALNT2Q8NCR0 500 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 RSPH1Q8WYR4 309 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 VWCEQ96DN2 955 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 CALR3Q96L12 384 aaKnown RBP15.56■□□□□ 0.08
CBX3-201ENST00000337620 ST7Q9NRC1 585 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
CBX3-201ENST00000337620 HYOU1Q9Y4L1 999 aa15.56■□□□□ 0.08
CBX3-201ENST00000337620 KIAA0355O15063 1070 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 MTA2O94776 668 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 PTPN1P18031 435 aaKnown RBP15.55■□□□□ 0.08
CBX3-201ENST00000337620 PAX3P23760 479 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 CDR1P51861 262 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 ARHGAP17Q68EM7 881 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 CPXM1Q96SM3 734 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 NRDE2Q9H7Z3 1164 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 MRPL47Q9HD33 250 aaKnown RBP15.55■□□□□ 0.08
CBX3-201ENST00000337620 PARVAQ9NVD7 372 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 ANAPC7Q9UJX3 599 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 AMFRQ9UKV5 643 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 SNX12Q9UMY4 172 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 M0QZQ0 153 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 CXCR5P32302 372 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 PDCLQ13371 301 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 MAMLD1Q13495 774 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 TUBB2AQ13885 445 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 RPS6KA1Q15418 735 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 TTC30AQ86WT1 665 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 MSANTD4Q8NCY6 345 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 SLC2A14Q8TDB8 520 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 C18orf8Q96DM3 657 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 TUBB2BQ9BVA1 445 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 TJP2Q9UDY2 1190 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 ALG6Q9Y672 507 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 SCINQ9Y6U3 715 aa15.55■□□□□ 0.08
CBX3-201ENST00000337620 TADA2AO75478 443 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 GJB6O95452 261 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 PFKMP08237 780 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 CCDC142Q17RM4 750 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 PLEKHA7Q6IQ23 1121 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 DNAJC24Q6P3W2 148 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 NT5DC3Q86UY8 548 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 CAPZA3Q96KX2 299 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 SUSD3Q96L08 255 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 OSBPL9Q96SU4 736 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 SYT15Q9BQS2 421 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
CBX3-201ENST00000337620 TRIM7Q9C029 511 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms