RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HSPA6P17066 643 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CYP3A5P20815 502 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ATXN1P54253 815 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 BYSLQ13895 437 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 MPP2Q14168 576 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CCL15Q16663 113 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 FAM102AQ5T9C2 384 aaPredicted RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 ANKRD22Q5VYY1 191 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 TSHZ1Q6ZSZ6 1077 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 EXOC3L1Q86VI1 746 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 HOOK3Q86VS8 718 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ZNF677Q86XU0 584 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 LRRC34Q8IZ02 419 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 UBR7Q8N806 425 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 DYDC1Q8WWB3 177 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 NDRG1Q92597 394 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 TLCD1Q96CP7 247 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 RBM15Q96T37 977 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNCA-201ENST00000336904 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 FZD8Q9H461 694 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SYNJ2BP-COX16A0A087WUM0 186 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 IGKV6-21A0A0C4DH24 114 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TCRBV7S3A2A0A539 114 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 H3BRB1 525 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TRAPPC3O43617 180 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 CST8O60676 142 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 LRCH4O75427 683 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 LGR5O75473 907 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 NPTXRO95502 500 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SLC25A27O95847 323 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 PDGFRBP09619 1106 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 MYBL1P10243 752 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 RARGP13631 454 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SMPD1P17405 629 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TFE3P19532 575 aaPredicted RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 NDST1P52848 882 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 GRM1Q13255 1194 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 PPIL2Q13356 520 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TCEAL1Q15170 157 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 ZNF618Q5T7W0 954 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TRNP1Q6NT89 227 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 MAMDC4Q6UXC1 1216 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 CLEC4CQ8WTT0 213 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNCA-201ENST00000336904 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 HPDLQ96IR7 371 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 CFAP57Q96MR6 1250 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 XPO6Q96QU8 1125 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 KLF6Q99612 283 aaPredicted RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 TUT1Q9H6E5 874 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 INTS9Q9NV88 658 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNCA-201ENST00000336904 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 COX16Q9P0S2 106 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 IP6K2Q9UHH9 426 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SNX9Q9Y5X1 595 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SCINQ9Y6U3 715 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SCN1AP35498 2009 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TMEM120BA0PK00 339 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 E5RJQ4 531 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 CXCL11O14625 94 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 LIASO43766 372 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 HBP1O60381 514 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SNAI1O95863 264 aaPredicted RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 FAM107AO95990 144 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 PHKA2P46019 1235 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 BEX3Q00994 111 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 OTUD4Q01804 1114 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 OR6B2Q6IFH4 312 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 DPY19L2Q6NUT2 758 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 C1orf228Q6PIY5 440 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 ILDR2Q71H61 639 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 ZBED8Q8IZ13 594 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 C4orf33Q8N1A6 199 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 OTUD6BQ8N6M0 293 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 ACTL9Q8TC94 416 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 MORC4Q8TE76 937 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 TRIM11Q96F44 468 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 ZMAT2Q96NC0 199 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 MRPL45Q9BRJ2 306 aaKnown RBP9.33□□□□□ -0.92
SNCA-201ENST00000336904 DPEP3Q9H4B8 488 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 VPS37BQ9H9H4 285 aa9.33□□□□□ -0.92
SNCA-201ENST00000336904 GOLGA8RI6L899 631 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PSTPIP1O43586 416 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 KIAA0754O94854 1291 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 NUDT17P0C025 328 aa9.32□□□□□ -0.92
SNCA-201ENST00000336904 PROZP22891 400 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms