RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 DIS3Q9Y2L1 958 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 ANKRD12Q6UB98 2062 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 COPEO14579 308 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 USP12O75317 370 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 LGR5O75473 907 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 CYP2C8P10632 490 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RARBP10826 455 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 GZMAP12544 262 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 GLRA2P23416 452 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RABGGTBP53611 331 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 MARSP56192 900 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 ARL4CP56559 192 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 WNT7BP56706 349 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 AP1B1Q10567 949 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RAPH1Q70E73 1250 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 MTDHQ86UE4 582 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 ARMC2Q8NEN0 867 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RBM41Q96IZ5 413 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 TIMM13Q9Y5L4 95 aaPredicted RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 COMMD10Q9Y6G5 202 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 A0A0A6YYK5 440 aaPredicted RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 A8MXQ7 604 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ADM5C9JUS6 153 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 PROSCO94903 275 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 RASSF2P50749 326 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 ITKQ08881 620 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 GPR162Q16538 588 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 SH3PXD2AQ5TCZ1 1133 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 C6orf163Q5TEZ5 329 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 JOSD2Q8TAC2 188 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 USP33Q8TEY7 942 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 SEPT1Q8WYJ6 367 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 FAM136AQ96C01 138 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 FAM161BQ96MY7 647 aa8.64□□□□□ -1.03
HPS4-201ENST00000336873 MPHOSPH6Q99547 160 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
HPS4-201ENST00000336873 MAPK13O15264 365 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 FAM155BO75949 473 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ANP32DO95626 131 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SERPINB6P35237 376 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 GTF2A2P52657 109 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 GTF2BQ00403 316 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 MAMLD1Q13495 774 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ATF7IP2Q5U623 682 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 EEF1DP3Q658K8 133 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 CROCCP2Q86T23 111 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 LRRC6Q86X45 466 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 TMEM192Q8IY95 271 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 EFCAB3Q8N7B9 438 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SPDL1Q96EA4 605 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 LPIN3Q9BQK8 851 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 KCND2Q9NZV8 630 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 RPTORQ8N122 1335 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 BRCA2P51587 3418 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 LDHAP00338 332 aaKnown RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 CTSHP09668 335 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 DRD4P21917 467 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 AKAP5P24588 427 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SLC8A1P32418 973 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SP2Q02086 613 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ERMARDQ5T6L9 678 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ZDHHC24Q6UX98 284 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 FAM131BQ86XD5 332 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 MAP4K3Q8IVH8 894 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ARID3BQ8IVW6 561 aaPredicted RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 ABRAQ8N0Z2 381 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 NDRG1Q92597 394 aaKnown RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 RPS6KC1Q96S38 1066 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 APOBEC3GQ9HC16 384 aaKnown RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 PDGFCQ9NRA1 345 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ARL2BPQ9Y2Y0 163 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 NEMP1O14524 444 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 HOXA7P31268 230 aaPredicted RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 GBP1P32455 592 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 CA8P35219 290 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 LMNB2Q03252 620 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 PTK7Q13308 1070 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 CNGA2Q16280 664 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SUPT20HL1Q3ZLR7 823 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 COBLL1Q53SF7 1204 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 TMEM63BQ5T3F8 832 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 DENND1BQ6P3S1 775 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 TRPM4Q8TD43 1214 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 DEPDC1BQ8WUY9 529 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 CLEC4DQ8WXI8 215 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 CLMNQ96JQ2 1002 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 SCYL1Q96KG9 808 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 RMDN2Q96LZ7 410 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ACAP3Q96P50 834 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 B3GNT5Q9BYG0 378 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
HPS4-201ENST00000336873 XPNPEP1Q9NQW7 623 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms