RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATP12AP54707 1039 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 IL5RAQ01344 420 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 SEMA3FQ13275 785 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 NCF4Q15080 339 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 LRRC6Q86X45 466 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ADSSL1Q8N142 457 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 COPG2Q9UBF2 871 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ZBTB7AO95365 584 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 CAPZA2P47755 286 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 ACCSLQ4AC99 568 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 PDPK2PQ6A1A2 396 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 DGKHQ86XP1 1220 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 FAM192AQ9GZU8 254 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 L2HGDHQ9H9P8 463 aa10.2□□□□□ -0.78
COL4A6-201ENST00000334504 A8MXQ7 604 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 NDUFS3O75489 264 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MED26O95402 600 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PTPN7P35236 360 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TAF2Q6P1X5 1199 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 OTOAQ7RTW8 1153 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FAM160B2Q86V87 743 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 SGF29Q96ES7 293 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 CTNNAL1Q9UBT7 734 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DNAJC16Q9Y2G8 782 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 LEMD3Q9Y2U8 911 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 A0A1W2PQJ5 194 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MEI4A8MW99 385 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TK2O00142 265 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TBC1D12O60347 775 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TNFRSF21O75509 655 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 NMT1P30419 496 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TALDO1P37837 337 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 SERPINH1P50454 418 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DCTN2Q13561 401 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DGUOKQ16854 277 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DGKKQ5KSL6 1271 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 IRGCQ6NXR0 463 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 B3GNT6Q6ZMB0 384 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FLAD1Q8NFF5 587 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 CENPTQ96BT3 561 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DCUN1D1Q96GG9 259 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DHX36Q9H2U1 1008 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DBNDD1Q9H9R9 158 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TDP2O95551 362 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 GSTT1P30711 240 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TRMT5Q32P41 509 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 SYTL3Q4VX76 610 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM237Q96Q45 408 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM165Q9HC07 324 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PDXKO00764 312 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 KRT6AP02538 564 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 KLRC1P26715 233 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 USP11P51784 963 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PUDPQ08623 228 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF618Q5T7W0 954 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FAM71DQ8N9W8 422 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 EIF2AK1Q9BQI3 630 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PGK2P07205 417 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MLNP12872 115 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 RAG1P15918 1043 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FLT3P36888 993 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 SFSWAPQ12872 951 aaKnown RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PIGHQ14442 188 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PCSK7Q16549 785 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 ZSWIM7Q19AV6 140 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 KLHL12Q53G59 568 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 ISLR2Q6UXK2 745 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 FAM81AQ8TBF8 368 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 ANKRD49Q8WVL7 239 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 C18orf8Q96DM3 657 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MKNK1Q9BUB5 465 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 VPS33BQ9H267 617 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 CLCA2Q9UQC9 943 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 PZPP20742 1482 aa10.19□□□□□ -0.78
COL4A6-201ENST00000334504 MAP3K13O43283 966 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PDE9AO76083 593 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM253P0C7T8 217 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 MCAMP43121 646 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ORC2Q13416 577 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TBCELQ5QJ74 424 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CHMP1BQ7LBR1 199 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 SLC10A4Q96EP9 437 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 QKIQ96PU8 341 aaKnown RBP eCLIP10.18□□□□□ -0.785e-7■■■■□ 24
COL4A6-201ENST00000334504 OLFM1Q99784 485 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 GRIP2Q9C0E4 1043 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 L1RE1Q9UN81 338 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ALG6Q9Y672 507 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 H2AFYO75367 372 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 BGNP21810 368 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PHKA2P46019 1235 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 HSD17B4P51659 736 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 NFYCQ13952 458 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms