RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CYP3A4P08684 503 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 POLR2MP0CAP2 368 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 SLC18A1P54219 525 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 NFX1Q12986 1120 aaKnown RBP14.43□□□□□ -0.1
SYNE3-201ENST00000334258 DYNC1I2Q13409 638 aaKnown RBP14.43□□□□□ -0.1
SYNE3-201ENST00000334258 CFAP157Q5JU67 520 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 C3orf62Q6ZUJ4 267 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 MIER3Q7Z3K6 550 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 ZNF398Q8TD17 642 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 GPRC5CQ9NQ84 441 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 PCMTD2Q9NV79 361 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 ANGPTL2Q9UKU9 493 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 IKBKGQ9Y6K9 419 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.43□□□□□ -0.1
SYNE3-201ENST00000334258 H3BRJ5 948 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 GRIN3BO60391 1043 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 NEK3P51956 506 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 HIF1AQ16665 826 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 IZUMO2Q6UXV1 221 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 PALM2Q8IXS6 379 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 DDX1Q92499 740 aaKnown RBP14.43□□□□□ -0.1
SYNE3-201ENST00000334258 CYLDQ9NQC7 956 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 KANSL3Q9P2N6 904 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 SLC24A2Q9UI40 661 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 MYH11P35749 1972 aa14.43□□□□□ -0.1
SYNE3-201ENST00000334258 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 CIB2O75838 187 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 MT-ND3P03897 115 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 KRT1P04264 644 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 AMPD1P23109 780 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PHBP35232 272 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 CXCL9Q07325 125 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PTPRN2Q92932 1015 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 TRIM11Q96F44 468 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 TMEM121Q9BTD3 319 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.42□□□□□ -0.15e-7■■■□□ 15
SYNE3-201ENST00000334258 MTO1Q9Y2Z2 717 aaKnown RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ARFGEF1Q9Y6D6 1849 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 SMAPO00193 183 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ENO1P06733 434 aaKnown RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 MYL2P10916 166 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ABCB5Q2M3G0 1257 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 FAM81AQ8TBF8 368 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 C1orf112Q9NSG2 853 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ZNF212Q9UDV6 495 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 TMEM150BA6NC51 233 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 FCHO1O14526 889 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 ALOX15BO15296 676 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 LIASO43766 372 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 LPXNO60711 386 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PAX3P23760 479 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 KDSRQ06136 332 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 BBS9Q3SYG4 887 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 SPDYAQ5MJ70 313 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 FAM102BQ5T8I3 360 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 KBTBD2Q8IY47 623 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 CCDC110Q8TBZ0 833 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PTCD3Q96EY7 689 aaKnown RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PAFAH2Q99487 392 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 KIFC3Q9BVG8 833 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 TMEM8AQ9HCN3 771 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 AVENQ9NQS1 362 aaPredicted RBP14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
SYNE3-201ENST00000334258 PSTPIP1O43586 416 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 OPHN1O60890 802 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 LYNP07948 512 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 CDK16Q00536 496 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 ALCAMQ13740 583 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 MORF4L2Q15014 288 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 LRRC36Q1X8D7 754 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 SV2AQ7L0J3 742 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 RHPN2Q8IUC4 686 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 TRIM42Q8IWZ5 723 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 EXD1Q8NHP7 514 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 MKL1Q969V6 931 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 FAM111AQ96PZ2 611 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 FNBP1Q96RU3 617 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 IQCGQ9H095 443 aaKnown RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 VCX3BQ9H321 246 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 VCX3AQ9NNX9 186 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 KRT82Q9NSB4 513 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 PPARGC1AQ9UBK2 798 aaKnown RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 ATP6V1G1O75348 118 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 IMPDH2P12268 514 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 DYNLT1P63172 113 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 RASA2Q15283 850 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 LMBRD2Q68DH5 695 aaPredicted RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 POMGNT1Q8WZA1 660 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 GATA6Q92908 595 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 BICD1Q96G01 975 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 THTPAQ9BU02 230 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 STRA6Q9BX79 667 aa14.41□□□□□ -0.1
SYNE3-201ENST00000334258 MMADHCQ9H3L0 296 aaPredicted RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 MRPL47Q9HD33 250 aaKnown RBP14.41□□□□□ -0.1
SYNE3-201ENST00000334258 GINM1Q9NU53 330 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms