RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ANXA13P27216 316 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 NOP14P78316 857 aaKnown RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 EEF1DP3Q658K8 133 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 GAD1Q99259 594 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 PI4K2AQ9BTU6 479 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ASB7Q9H672 318 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 KANSL3Q9P2N6 904 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 HES2Q9Y543 173 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 A0A1W2PQ45 241 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-201ENST00000334136 A0A1W2PQY0 241 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 TBKBP1A7MCY6 615 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 RASA4BC9J798 803 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 P4HA2O15460 535 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 RASA4O43374 803 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 RECQL4O94761 1208 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 FERMT1Q9BQL6 677 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 CDT1Q9H211 546 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 ECT2Q9H8V3 914 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 TXLNGQ9NUQ3 528 aa12.43□□□□□ -0.42
HDAC6-201ENST00000334136 GRID2IPA4D2P6 1211 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 TCP11X1B4DZS4 312 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 RFX1P22670 979 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 PNPLA4P41247 253 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 ITIH3Q06033 890 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CAPRIN2Q6IMN6 1127 aaKnown RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CCDC117Q8IWD4 279 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 EMID1Q96A84 441 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 TNIP3Q96KP6 325 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 DNAJC7Q99615 494 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CGRRF1Q99675 332 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 C16orf70Q9BSU1 422 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 DCTN4Q9UJW0 460 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 PADI3Q9ULW8 664 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 A0A087X0T9 212 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 FAM228BP0C875 321 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 DYNLT1P63172 113 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 KRT17Q04695 432 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 BTG3Q14201 252 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 GBP7Q8N8V2 638 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CASKIN2Q8WXE0 1202 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CYTH2Q99418 400 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 PCYT2Q99447 389 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 TSC22D3Q99576 134 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 KCND1Q9NSA2 647 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 A0A0G2JND7 137 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 GOLGA8SH3BPF8 625 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 DNM1LO00429 736 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 SGPL1O95470 568 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 MYBL2P10244 700 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 HSD17B3P37058 310 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 CYB5D1Q6P9G0 228 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 SIX6OS1Q8N1H7 587 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 MORC4Q8TE76 937 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 SGSM3Q96HU1 749 aa12.42□□□□□ -0.42
HDAC6-201ENST00000334136 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 SGK1O00141 431 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 ALDH2P05091 517 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 SV2AQ7L0J3 742 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 HAUS1Q96CS2 278 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 ARHGAP20Q9P2F6 1191 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 WEE2P0C1S8 567 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 YWHAGP61981 247 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 WDR49Q8IV35 697 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 C7orf61Q8IZ16 206 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 TMEM35BQ8NCS4 154 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 EDEM3Q9BZQ6 932 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 NIF3L1Q9GZT8 377 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 ARHGAP28Q9P2N2 729 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 TELO2Q9Y4R8 837 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 MYADML2A6NDP7 307 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 CASTOR2A6NHX0 329 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 LACTBL1A8MY62 500 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 PODXLO00592 558 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 SBF1O95248 1867 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 CCDC137Q6PK04 289 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 CHORDC1Q9UHD1 332 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms