RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 MAGEA4P43358 317 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 TNFAIP8L3Q5GJ75 292 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 ZNF667Q5HYK9 610 aa19.97■□□□□ 0.79
RFTN1-201ENST00000334133 RBM41Q96IZ5 413 aaKnown RBP19.97■□□□□ 0.79
RFTN1-201ENST00000334133 POC1B-GALNT4F8VUJ3 575 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 LGR5O75473 907 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 STAG3L1P0CL83 205 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 AP3M2P53677 418 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 TMED2Q15363 201 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 HOMER3Q9NSC5 361 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 OTOFQ9HC10 1997 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 hCG_1818297A0A087WSY0 165 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 TCP11X1B4DZS4 312 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 PROZP22891 400 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 MFSD5Q6N075 450 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 HIBCHQ6NVY1 386 aaPredicted RBP19.96■□□□□ 0.79
RFTN1-201ENST00000334133 ANKMY2Q8IV38 441 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 CENPTQ96BT3 561 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 ROPN1BQ9BZX4 212 aaPredicted RBP19.96■□□□□ 0.79
RFTN1-201ENST00000334133 STMN4Q9H169 189 aaPredicted RBP19.96■□□□□ 0.79
RFTN1-201ENST00000334133 ROPN1Q9HAT0 212 aaPredicted RBP19.96■□□□□ 0.79
RFTN1-201ENST00000334133 IFT122Q9HBG6 1241 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 FGFR1OP2Q9NVK5 253 aa19.96■□□□□ 0.79
RFTN1-201ENST00000334133 GRAP2O75791 330 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 CDKN2BP42772 138 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 RAD23BP54727 409 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 GDF10P55107 478 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 PPP1R15BQ5SWA1 713 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 SH3PXD2AQ5TCZ1 1133 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 PLPPR4Q7Z2D5 763 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 ANKRD13AQ8IZ07 590 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 KCNN1Q92952 543 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 CDCA5Q96FF9 252 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 PAIP2Q9BPZ3 127 aaKnown RBP19.95■□□□□ 0.78
RFTN1-201ENST00000334133 C2orf40Q9H1Z8 148 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 SMARCAD1Q9H4L7 1026 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 LRCH4O75427 683 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 ERBB2P04626 1255 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 TFDP3Q5H9I0 405 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 C3orf20Q8ND61 904 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 HSPH1Q92598 858 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 SERPINB12Q96P63 405 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 ELOVL4Q9GZR5 314 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 CXCL16Q9H2A7 254 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 KIF9Q9HAQ2 790 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 SPAG7O75391 227 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 LSM8O95777 96 aaKnown RBP19.95■□□□□ 0.78
RFTN1-201ENST00000334133 TFDP1Q14186 410 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 CCDC197Q8NCU1 140 aa19.95■□□□□ 0.78
RFTN1-201ENST00000334133 LOC285556D6RIA3 1793 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 CST8O60676 142 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 SLC25A27O95847 323 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 CPP00450 1065 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 EIF4BP23588 611 aaKnown RBP19.94■□□□□ 0.78
RFTN1-201ENST00000334133 ACTN3Q08043 901 aaPredicted RBP19.94■□□□□ 0.78
RFTN1-201ENST00000334133 KCNV1Q6PIU1 500 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 DNAJC25-GNG10A0A024R161 153 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 C22orf31O95567 290 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 POLR2BP30876 1174 aaKnown RBP19.94■□□□□ 0.78
RFTN1-201ENST00000334133 TMEM62Q0P6H9 643 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 ANKRD20A8PQ5CZ79 823 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 YTHDF3Q7Z739 585 aaKnown RBP19.94■□□□□ 0.78
RFTN1-201ENST00000334133 ZBED8Q8IZ13 594 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 ALLCQ8N6M5 410 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 ACTL9Q8TC94 416 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 VPS37BQ9H9H4 285 aa19.94■□□□□ 0.78
RFTN1-201ENST00000334133 SPDYE5A6NIY4 337 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 M0QYV0 167 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 B4GALT4O60513 344 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 FSBPO95073 299 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 HNRNPH1P31943 449 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 OTUD4Q01804 1114 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 CAV1Q03135 178 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 PIGHQ14442 188 aaPredicted RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 EAPPQ56P03 285 aaPredicted RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 NUGGCQ68CJ6 796 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 ARMCX2Q7L311 632 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 SLC4A11Q8NBS3 891 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 THOC1Q96FV9 657 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 HEXIM2Q96MH2 286 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 ZNF408Q9H9D4 720 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 DNALI1O14645 258 aaPredicted RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 HBP1O60381 514 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 GRM1Q13255 1194 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 MOGSQ13724 837 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 TTLL4Q14679 1199 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 CDO1Q16878 200 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 CROCCP2Q86T23 111 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 LRRN4Q8WUT4 740 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 AFG1LQ8WV93 481 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 PIWIL1Q96J94 861 aaKnown RBP19.93■□□□□ 0.78
RFTN1-201ENST00000334133 CALN1Q9BXU9 219 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 AGAP1Q9UPQ3 857 aa19.93■□□□□ 0.78
RFTN1-201ENST00000334133 FAM133BQ5BKY9 247 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 C12orf29Q8N999 325 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 SAMD15Q9P1V8 674 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 PCDHGC3Q9UN70 934 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 EXOC1LA0A1B0GW35 172 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 MAP3K6O95382 1288 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms