RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ZNF148Q9UQR1 794 aa11.32□□□□□ -0.6
CCDC172-201ENST00000333254 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
CCDC172-201ENST00000333254 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 E7ESA3 106 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 F8VP50 259 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 CHUKO15111 745 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ARIH2O95376 493 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 SSR1P43307 286 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ARSEP51690 589 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 MBTD1Q05BQ5 628 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 CCDC15Q0P6D6 951 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 RIPK1Q13546 671 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 WDR72Q3MJ13 1102 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 PTPN20Q4JDL3 420 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 CCDC38Q502W7 563 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 EFHC2Q5JST6 749 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ZNF484Q5JVG2 852 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 TMEM63BQ5T3F8 832 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 RNF43Q68DV7 783 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ELAC2Q9BQ52 826 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 FHDC1Q9C0D6 1143 aaPredicted RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 CDT1Q9H211 546 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC172-201ENST00000333254 PRKAG3Q9UGI9 489 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
CCDC172-201ENST00000333254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 EXOC1LA0A1B0GW35 172 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 LRRD1A4D1F6 860 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 MGRN1O60291 552 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 LRCH4O75427 683 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ENDOD1O94919 500 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 HMGCRP04035 888 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CETPP11597 493 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 KRT3P12035 628 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 KRT10P13645 584 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 P4HA1P13674 534 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 TCF4P15884 667 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PECAM1P16284 738 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PSMA2P25787 234 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 GCAP28676 217 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 STX2P32856 288 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PCK1P35558 622 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PHKA2P46019 1235 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 VPS41P49754 854 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 RAD23BP54727 409 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 IL9RQ01113 521 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 GPS1Q13098 491 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 LLGL1Q15334 1064 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 MTFR1Q15390 333 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CMASQ8NFW8 434 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 USP6NLQ92738 828 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 C9orf72Q96LT7 481 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 MROH8Q9H579 483 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 TCP11X1B4DZS4 312 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PI4K2BG5E9Z4 385 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CILPO75339 1184 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ASMTLO95671 621 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 APOC2P02655 101 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 VDRP11473 427 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 KDELR1P24390 212 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PHBP35232 272 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 GJC1P36383 396 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 IFNAR2P48551 515 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 INCA1Q0VD86 236 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 MPP2Q14168 576 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 STILQ15468 1287 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms