RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SERPINB3P29508 390 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 RCN2Q14257 317 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 SGSM1Q2NKQ1 1148 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 VPS52Q8N1B4 723 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 DTX3LQ8TDB6 740 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 FAM136AQ96C01 138 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 SSU72Q9NP77 194 aaKnown RBP24.83■■□□□ 1.57
TSKU-201ENST00000333090 DRG1Q9Y295 367 aaKnown RBP24.83■■□□□ 1.57
TSKU-201ENST00000333090 NFASCO94856 1347 aa24.83■■□□□ 1.57
TSKU-201ENST00000333090 CAPN9O14815 690 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 PHBP35232 272 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 ARFIP2P53365 341 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 CUL2Q13617 745 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 ZACNQ401N2 412 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 MSS51Q4VC12 460 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 AP1ARQ63HQ0 302 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 RHPN2Q8IUC4 686 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 NRG4Q8WWG1 115 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 SCG3Q8WXD2 468 aaKnown RBP24.83■■□□□ 1.56
TSKU-201ENST00000333090 PTCD3Q96EY7 689 aaKnown RBP24.83■■□□□ 1.56
TSKU-201ENST00000333090 TSSK1BQ9BXA7 367 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 PCDH9Q9HC56 1237 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 PAPOLBQ9NRJ5 636 aaKnown RBP24.83■■□□□ 1.56
TSKU-201ENST00000333090 ANKEF1Q9NU02 776 aa24.83■■□□□ 1.56
TSKU-201ENST00000333090 SAE1Q9UBE0 346 aaPredicted RBP24.83■■□□□ 1.56
TSKU-201ENST00000333090 WDR64B1ANS9 1081 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 ZBED4O75132 1171 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 C1QBPQ07021 282 aaKnown RBP24.82■■□□□ 1.56
TSKU-201ENST00000333090 ANKRD22Q5VYY1 191 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 ATP11CQ8NB49 1132 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 NSL1Q96IY1 281 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 CEP170P1Q96L14 293 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 MCEEQ96PE7 176 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 PIDD1Q9HB75 910 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 APOBEC3GQ9HC16 384 aaKnown RBP24.82■■□□□ 1.56
TSKU-201ENST00000333090 FEM1BQ9UK73 627 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 DYNLT1P63172 113 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 FNBP1LQ5T0N5 605 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 PDGFDQ9GZP0 370 aaPredicted RBP24.82■■□□□ 1.56
TSKU-201ENST00000333090 LRCH1Q9Y2L9 728 aa24.82■■□□□ 1.56
TSKU-201ENST00000333090 hCG_1818297A0A087WSY0 165 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 SIGLEC16A6NMB1 481 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 ICAM1P05362 532 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 ACOT2P49753 483 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 PAPOLAP51003 745 aaKnown RBP24.81■■□□□ 1.56
TSKU-201ENST00000333090 MCL1Q07820 350 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 IRGCQ6NXR0 463 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 ADGRD1Q6QNK2 874 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 VCXQ9H320 206 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 PTPRJQ12913 1337 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 GARTP22102 1010 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 ZNF252P-AS1Q0IIN9 211 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 TFDP3Q5H9I0 405 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 RNF220Q5VTB9 566 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 ZC3H18Q86VM9 953 aaKnown RBP24.81■■□□□ 1.56
TSKU-201ENST00000333090 BANPQ8N9N5 519 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 SPIRE2Q8WWL2 714 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 NTPCRQ9BSD7 190 aaKnown RBP24.81■■□□□ 1.56
TSKU-201ENST00000333090 VPS11Q9H270 941 aa24.81■■□□□ 1.56
TSKU-201ENST00000333090 C2orf71A6NGG8 1288 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 TM9SF1O15321 606 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 ITGAVP06756 1048 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 FKBP1AP62942 108 aaKnown RBP24.8■■□□□ 1.56
TSKU-201ENST00000333090 BIRC2Q13490 618 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 DCUN1D2Q6PH85 259 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 WDR60Q8WVS4 1066 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 CLEC4DQ8WXI8 215 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 TMEM120AQ9BXJ8 343 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 PPP1R12CQ9BZL4 782 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 TMEM191CA6NGB0 347 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 TBX10O75333 385 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 VNN1O95497 513 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 C4BPAP04003 597 aaKnown RBP24.8■■□□□ 1.56
TSKU-201ENST00000333090 TMEM191BP0C7N4 346 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 SKIP12755 728 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 JAK3P52333 1124 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 ARL4CP56559 192 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 RINLQ6ZS11 566 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 FBXO36Q8NEA4 188 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 STMN2Q93045 179 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 NKD2Q969F2 451 aaPredicted RBP24.8■■□□□ 1.56
TSKU-201ENST00000333090 TAAR1Q96RJ0 339 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 DEFB129Q9H1M3 183 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 ACSS3Q9H6R3 686 aa24.8■■□□□ 1.56
TSKU-201ENST00000333090 INHBEP58166 350 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 LRRC74BQ6ZQY2 392 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 TUBB6Q9BUF5 446 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 FARP1Q9Y4F1 1045 aaPredicted RBP24.79■■□□□ 1.56
TSKU-201ENST00000333090 TESPA1A2RU30 521 aaPredicted RBP24.79■■□□□ 1.56
TSKU-201ENST00000333090 PSMG1O95456 288 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 LIG4P49917 911 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 GDF10P55107 478 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 NLRP11P59045 1033 aaKnown RBP24.79■■□□□ 1.56
TSKU-201ENST00000333090 SLC34A1Q06495 639 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 DGKZQ13574 1117 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 KLHL38Q2WGJ6 581 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 TTC7BQ86TV6 843 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 PALM2Q8IXS6 379 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 MZB1Q8WU39 189 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 CPT1BQ92523 772 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms