RNA–Protein interactions for RNA: ENST00000329468.3

NPAP1-201, Transcript of nuclear pore associated protein 1, humanhuman

APPRIS P1 BASIC

Gene NPAP1, Length 7,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1-201ENST00000329468 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
NPAP1-201ENST00000329468 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
NPAP1-201ENST00000329468 GPATCH2LQ9NWQ4 482 aa13.11□□□□□ -0.31
NPAP1-201ENST00000329468 AIM2O14862 343 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PATL1Q86TB9 770 aaKnown RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 SH2D3CQ8N5H7 860 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 SNX5Q9Y5X3 404 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 KLRC1P26715 233 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 BACE1P56817 501 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CDC42EP1Q00587 391 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PXMP2Q9NR77 195 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 SERPINI2O75830 405 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 NCALDP61601 193 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 AP2B1P63010 937 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 BEX3Q00994 111 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CAPZA2P47755 286 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 POLD3Q15054 466 aaPredicted RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 EDEM1Q92611 657 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PTGISQ16647 500 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 COG1Q8WTW3 980 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CHST12Q9NRB3 414 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 CST8O60676 142 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 ZNF200P98182 395 aaPredicted RBP13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PTK7Q13308 1070 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PGS1Q32NB8 556 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 C16orf59Q7L2K0 433 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 TRAPPC12Q8WVT3 735 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 SPATA16Q9BXB7 569 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 PTPRHQ9HD43 1115 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
NPAP1-201ENST00000329468 GMNCA6NCL1 334 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 F5H5T6 163 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 P4HA2O15460 535 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 SYNCRIPO60506 623 aaKnown RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 SLC16A3O15427 465 aaKnown RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 SKIP12755 728 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 TMC7Q7Z402 723 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 MED24O75448 989 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 PHACTR4Q8IZ21 702 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 RBM15Q96T37 977 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 NYAP2Q9P242 653 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 LCMT1Q9UIC8 334 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 MED14O60244 1454 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 ADCY3O60266 1144 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 PHF2O75151 1096 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 DGKZQ13574 1117 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 GALNT4Q8N4A0 578 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 TDRKHQ9Y2W6 561 aaKnown RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 AKAP10O43572 662 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 CYTH3O43739 400 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 URODP06132 367 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 RAG1P15918 1043 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 GLRBP48167 497 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 SMPD4Q9NXE4 827 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 A0A087WZ62 844 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 CLEC4FQ8N1N0 589 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPAP1-201ENST00000329468 RNF112Q9ULX5 631 aa13.09□□□□□ -0.31
NPAP1-201ENST00000329468 KRT4P19013 534 aa13.08□□□□□ -0.31
NPAP1-201ENST00000329468 SLC1A1P43005 524 aa13.08□□□□□ -0.31
NPAP1-201ENST00000329468 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.31
NPAP1-201ENST00000329468 SPATA4Q8NEY3 305 aa13.08□□□□□ -0.31
NPAP1-201ENST00000329468 DDTLA6NHG4 134 aaPredicted RBP13.08□□□□□ -0.32
NPAP1-201ENST00000329468 CBX4O00257 560 aa13.08□□□□□ -0.32
NPAP1-201ENST00000329468 THP07101 528 aa13.08□□□□□ -0.32
NPAP1-201ENST00000329468 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
NPAP1-201ENST00000329468 SLC11A2P49281 568 aa13.08□□□□□ -0.32
NPAP1-201ENST00000329468 ALFQ53S48 1182 aa13.08□□□□□ -0.32
NPAP1-201ENST00000329468 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms