RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 OAZ2O95190 189 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 UNGP13051 313 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 ACAT1P24752 427 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 CENPCQ03188 943 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 GOLGA7BQ2TAP0 167 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 FAM171A1Q5VUB5 890 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 PASD1Q8IV76 773 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 REXO1L1PQ8IX06 675 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 FIBCD1Q8N539 461 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 C12orf29Q8N999 325 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 ACBD6Q9BR61 282 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 ZNF518BQ9C0D4 1074 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 TRMT1Q9NXH9 659 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 CEP83Q9Y592 693 aa10.88□□□□□ -0.67
VIPAS39-201ENST00000327028 PJA2O43164 708 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 H2AFZP0C0S5 128 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 PPM1AP35813 382 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 PSMC1P62191 440 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 KIAA0319Q5VV43 1072 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 NAA35Q5VZE5 725 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 ACAD10Q6JQN1 1059 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 DENND1BQ6P3S1 775 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 H2AFVQ71UI9 128 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 RNF168Q8IYW5 571 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 PACSIN1Q9BY11 444 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 TSGA10Q9BZW7 698 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 AAASQ9NRG9 546 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 TSPAN16Q9UKR8 245 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 CEP290O15078 2479 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 RCCD1A6NED2 376 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 M0QYV0 167 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 TLL1O43897 1013 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 LINC00271P0C7V0 271 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 CCDC130P13994 396 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 SSTR3P32745 418 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 ARHGAP25P42331 645 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 MRPL58Q14197 206 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 MDH1BQ5I0G3 518 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 PKMYT1Q99640 499 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 HNRNPABQ99729 332 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 LPIN3Q9BQK8 851 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 VN1R3Q9BXE9 311 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 CRTAC1Q9NQ79 661 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 SPG21Q9NZD8 308 aa10.87□□□□□ -0.67
VIPAS39-201ENST00000327028 A0A0U1RQJ8 604 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ATP2C2O75185 946 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TMEM253P0C7T8 217 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 NSFP46459 744 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TSPY1Q01534 308 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 KIF5AQ12840 1032 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 C1orf131Q8NDD1 294 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 OR10T2Q8NGX3 314 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TMEM169Q96HH4 297 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 RNPC3Q96LT9 517 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 HERC2P3Q9BVR0 1158 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 NLRC5Q86WI3 1866 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 NCANO14594 1321 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ANKRD62A6NC57 917 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 BTNL10A8MVZ5 291 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ZNF500O60304 480 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 CAPN15O75808 1086 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 FTLP02792 175 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 SETSIPP0DME0 302 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 GALCP54803 685 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 PKDCCQ504Y2 493 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 ARHGAP29Q52LW3 1261 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 FAM171BQ6P995 826 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 MON1BQ7L1V2 547 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 PHF13Q86YI8 300 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 CPA5Q8WXQ8 436 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TRIM11Q96F44 468 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 OXCT2Q9BYC2 517 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 LACRTQ9GZZ8 138 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 TFR2Q9UP52 801 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 PCDHB12Q9Y5F1 795 aa10.86□□□□□ -0.67
VIPAS39-201ENST00000327028 PTPRDP23468 1912 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 OR6C75A6NL08 312 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 H7C4K7 107 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 KRT86O43790 486 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 SOD2P04179 222 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 BCAT1P54687 386 aa10.85□□□□□ -0.67
VIPAS39-201ENST00000327028 PLCB3Q01970 1234 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms