RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 GPR152Q8TDT2 470 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 TMEM169Q96HH4 297 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 TNIP3Q96KP6 325 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 NIFKQ9BYG3 293 aaKnown RBP13.85□□□□□ -0.19
LIN28A-202ENST00000326279 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
LIN28A-202ENST00000326279 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 MAP3K7CLP57077 242 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 ZBTB16Q05516 673 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 CUL1Q13616 776 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 MDH1BQ5I0G3 518 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 WSCD1Q658N2 575 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 MIB1Q86YT6 1006 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 SEPT8Q92599 483 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 CABS1Q96KC9 395 aa13.85□□□□□ -0.19
LIN28A-202ENST00000326279 ZMYND8Q9ULU4 1186 aaPredicted RBP13.85□□□□□ -0.19
LIN28A-202ENST00000326279 ZNF131P52739 623 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 AP3M2P53677 418 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 FAM171A1Q5VUB5 890 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 LPIN3Q9BQK8 851 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 FRMD3A2A2Y4 597 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 MCF2P10911 925 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 FGFR1P11362 822 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 CCDC130P13994 396 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 SAT1P21673 171 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 MARCKSL1P49006 195 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 PPM1FP49593 454 aaPredicted RBP13.84□□□□□ -0.19
LIN28A-202ENST00000326279 TLE2Q04725 743 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 PSMD6Q15008 389 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 TRIM72Q6ZMU5 477 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 WDR49Q8IV35 697 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 C9orf72Q96LT7 481 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 OSBPL8Q9BZF1 889 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 CERS4Q9HA82 394 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 TRPC7Q9HCX4 862 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 GPATCH2LQ9NWQ4 482 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
LIN28A-202ENST00000326279 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 FAM182AQ5T1J6 154 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 KDELC2Q7Z4H8 507 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 CCDC117Q8IWD4 279 aaPredicted RBP13.84□□□□□ -0.19
LIN28A-202ENST00000326279 EDEM1Q92611 657 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 MROH7Q68CQ1 1323 aa13.84□□□□□ -0.19
LIN28A-202ENST00000326279 PRRG1O14668 218 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 KPNA6O60684 536 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 AP1G2O75843 785 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 SASH3O75995 380 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 NR1D1P20393 614 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 STX2P32856 288 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.19
LIN28A-202ENST00000326279 CCDC91Q7Z6B0 441 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.19
LIN28A-202ENST00000326279 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.19
LIN28A-202ENST00000326279 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 ZNF446Q9NWS9 450 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 STRIP2Q9ULQ0 834 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 L1RE1Q9UN81 338 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 TNFSF13BQ9Y275 285 aa13.83□□□□□ -0.19
LIN28A-202ENST00000326279 COL11A2P13942 1736 aaPredicted RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 PODXLO00592 558 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 CHRNA3P32297 505 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 TMED2Q15363 201 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 JAMLQ86YT9 394 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 CASKIN2Q8WXE0 1202 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ZNF512Q96ME7 567 aaPredicted RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 C16orf70Q9BSU1 422 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 IPPQ9Y573 584 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 PCNTO95613 3336 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 CLDN5O00501 218 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ZBED1O96006 694 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ARL4AP40617 200 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 MAGOHP61326 146 aaKnown RBP13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ZNF618Q5T7W0 954 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 B3GALT6Q96L58 329 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 TRIM7Q9C029 511 aa13.83□□□□□ -0.2
LIN28A-202ENST00000326279 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 TSPAN1O60635 241 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
LIN28A-202ENST00000326279 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 HHATQ5VTY9 493 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 SLC9A9Q8IVB4 645 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
LIN28A-202ENST00000326279 THOC1Q96FV9 657 aaKnown RBP13.82□□□□□ -0.2
LIN28A-202ENST00000326279 RBM41Q96IZ5 413 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms