RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 GTF3C4Q9UKN8 822 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 NCKAP1Q9Y2A7 1128 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 GAKO14976 1311 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 SUPT3HO75486 399 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 SERPIND1P05546 499 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 RHOCP08134 193 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 TM4SF1P30408 202 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 STAT4Q14765 748 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 FIBCD1Q8N539 461 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 UBA3Q8TBC4 463 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 C1QTNF7Q9BXJ2 289 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 NMRK1Q9NWW6 199 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ITIH6Q6UXX5 1313 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 DYRK3O43781 588 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 HMGCRP04035 888 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 NR1D1P20393 614 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SPRP35270 261 aaPredicted RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 HSP90AA5PQ58FG0 334 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 FAM171A1Q5VUB5 890 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 MRNIPQ6NTE8 343 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SLC30A5Q8TAD4 765 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 USP33Q8TEY7 942 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SYN2Q92777 582 aaPredicted RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 PITPNM3Q9BZ71 974 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ELOVL4Q9GZR5 314 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 INTUQ9ULD6 942 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 NFASCO94856 1347 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 CFLARO15519 480 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 GRAP2O75791 330 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ZMYND10O75800 440 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 APOA4P06727 396 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ZBTB48P10074 688 aaPredicted RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 RBP3P10745 1247 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 STIP1P31948 543 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 KCNA1Q09470 495 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ILF2Q12905 390 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 NNTQ13423 1086 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 NAB2Q15742 525 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 FAM110CQ1W6H9 321 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 WNK4Q96J92 1243 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 OSBPL8Q9BZF1 889 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD28-201ENST00000324106 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 E2F6O75461 281 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 POLBP06746 335 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 BRAFP15056 766 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 LY6KQ17RY6 165 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD28-201ENST00000324106 EPM2AIP1Q7L775 607 aaPredicted RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 ACOT1Q86TX2 421 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 NUDCD3Q8IVD9 361 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 HS6ST3Q8IZP7 471 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SPATA18Q8TC71 538 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SEZ6LQ9BYH1 1024 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 MTMR12Q9C0I1 747 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 XAB2Q9HCS7 855 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 MRFAP1Q9Y605 127 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 KIAA1210Q9ULL0 1709 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 PHF20L1A8MW92 1017 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 ADCY6O43306 1168 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 H2AFYO75367 372 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 LSM8O95777 96 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 PTGER2P43116 358 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 RENBPP51606 427 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 RBBP7Q16576 425 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 TMEM86AQ8N2M4 240 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 KLHL29Q96CT2 875 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 PPARGC1AQ9UBK2 798 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 AAR2Q9Y312 384 aaKnown RBP9.35□□□□□ -0.91
CD28-201ENST00000324106 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
CD28-201ENST00000324106 SLC37A4O43826 429 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 SLC8A1P32418 973 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PMS2P54278 862 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 HDAC4P56524 1084 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ESRRGP62508 458 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 EFEMP1Q12805 493 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PDK2Q15119 407 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 SEC23AQ15436 765 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 NUGGCQ68CJ6 796 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 VPS37AQ8NEZ2 397 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 UROC1Q96N76 676 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ADAM2Q99965 735 aa9.34□□□□□ -0.91
CD28-201ENST00000324106 ZCCHC2Q9C0B9 1178 aaKnown RBP9.34□□□□□ -0.91
CD28-201ENST00000324106 TMEM117Q9H0C3 514 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms