RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CDC25CP30307 473 aa12.67□□□□□ -0.38
NCL-201ENST00000322723 RASA2Q15283 850 aa12.67□□□□□ -0.38
NCL-201ENST00000322723 LIMS2Q7Z4I7 341 aa12.67□□□□□ -0.38
NCL-201ENST00000322723 ALLCQ8N6M5 410 aa12.67□□□□□ -0.38
NCL-201ENST00000322723 C1orf54Q8WWF1 131 aa12.67□□□□□ -0.38
NCL-201ENST00000322723 RBM41Q96IZ5 413 aaKnown RBP12.67□□□□□ -0.38
NCL-201ENST00000322723 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
NCL-201ENST00000322723 SCN1AP35498 2009 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 MAGEB2O15479 319 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 RPL34P49207 117 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 YWHAEP62258 255 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 NFX1Q12986 1120 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 KCTD2Q14681 263 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ZKSCAN8Q15776 578 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 PTPN20Q4JDL3 420 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 CACNA2D3Q8IZS8 1091 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ANKS4BQ8N8V4 417 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 USP6NLQ92738 828 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 SMIM24O75264 130 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ITGAVP06756 1048 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 XYLT1Q86Y38 959 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 DERAQ9Y315 318 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 SNAI1O95863 264 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 DRD4P21917 467 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 TNFAIP2Q03169 654 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 GRB14Q14449 540 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ACAP1Q15027 740 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 SPOCD1Q6ZMY3 1216 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 PASD1Q8IV76 773 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ZCCHC9Q8N567 271 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 BBOF1Q8ND07 529 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 RAPGEF5Q92565 580 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 STRIP2Q9ULQ0 834 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 FNDC1Q4ZHG4 1894 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 TTC4O95801 387 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 OAS1P00973 400 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 NFICP08651 508 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 SNAPC2Q13487 334 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 C2CD6Q53TS8 623 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ANKRD23Q86SG2 305 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ZBTB33Q86T24 672 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 TBC1D1Q86TI0 1168 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 CCDC50Q8IVM0 306 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 KIAA0319LQ8IZA0 1049 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 ATG4AQ8WYN0 398 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 KAT2BQ92831 832 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
NCL-201ENST00000322723 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
NCL-201ENST00000322723 SLC8A1P32418 973 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 SLC10A6Q3KNW5 377 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 CEP120Q8N960 986 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 FHDC1Q9C0D6 1143 aaPredicted RBP12.65□□□□□ -0.38
NCL-201ENST00000322723 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 LACTBL1A8MY62 500 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 GJB1P08034 283 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 GCAP28676 217 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ITGA8P53708 1063 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
NCL-201ENST00000322723 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ALKAL1Q6UXT8 129 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 VSIG1Q86XK7 387 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 TDRPQ86YL5 185 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 RHPN2Q8IUC4 686 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 IMPG2Q9BZV3 1241 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
NCL-201ENST00000322723 GMNCA6NCL1 334 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 TSPAN1O60635 241 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 PFKMP08237 780 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 SRGAP2CP0DJJ0 459 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 EPHX2P34913 555 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 KRT71Q3SY84 523 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 TXNRD3NBQ6F5E7 133 aa12.65□□□□□ -0.39
NCL-201ENST00000322723 TWNKQ96RR1 684 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms