RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ZNF484Q5JVG2 852 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TTC13Q8NBP0 860 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TRAPPC12Q8WVT3 735 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 R3HDMLQ9H3Y0 253 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TXNRD2Q9NNW7 524 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 SAYSD1Q9NPB0 183 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 EURLQ9NYK6 297 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 SHOC2Q9UQ13 582 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 CXCL8P10145 99 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 MCF2P10911 925 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 ATICP31939 592 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 GPS1Q13098 491 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 PPIL2Q13356 520 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TXNRD3NBQ6F5E7 133 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 ARHGEF18Q6ZSZ5 1173 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 PCGF5Q86SE9 256 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 CEP120Q8N960 986 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 SLC35B2Q8TB61 432 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 CKAP2Q8WWK9 683 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 ELAC2Q9BQ52 826 aaKnown RBP23.55■■□□□ 1.36
PNKP-201ENST00000322344 ERAP1Q9NZ08 941 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 GOLGA8SH3BPF8 625 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 DNM1LO00429 736 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 RFC1P35251 1148 aaPredicted RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 SCTRP47872 440 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 CLCN3P51790 818 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 RAD23BP54727 409 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 PSMC1P62191 440 aaKnown RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 SLC25A11Q02978 314 aaKnown RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 ZNF268Q14587 947 aaPredicted RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 PRUNE1Q86TP1 453 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 TDRPQ86YL5 185 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 PPCSQ9HAB8 311 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 CYP3A43Q9HB55 503 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 SIX4Q9UIU6 781 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 C3orf70A6NLC5 250 aaPredicted RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 C22orf31O95567 290 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 GSTA1P08263 222 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 MKRN3Q13064 507 aaKnown RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 CCDC142Q17RM4 750 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 Q3C1V9 767 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 RNASEH2BQ5TBB1 312 aaKnown RBP23.54■■□□□ 1.36
PNKP-201ENST00000322344 PPP1R21Q6ZMI0 780 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 C1orf127Q8N9H9 656 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 GLIS1Q8NBF1 620 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 MGARPQ8TDB4 240 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 PHACTR1Q9C0D0 580 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 VRTNQ9H8Y1 702 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 NKIRAS1Q9NYS0 192 aa23.54■■□□□ 1.36
PNKP-201ENST00000322344 ASB14A6NK59 587 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 GJB1P08034 283 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 P4HA1P13674 534 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 CREB1P16220 341 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 PECAM1P16284 738 aaPredicted RBP23.53■■□□□ 1.36
PNKP-201ENST00000322344 RDXP35241 583 aaKnown RBP23.53■■□□□ 1.36
PNKP-201ENST00000322344 ACAP1Q15027 740 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 R3HDM1Q15032 1099 aaKnown RBP23.53■■□□□ 1.36
PNKP-201ENST00000322344 TAZQ16635 292 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 KYAT1Q16773 422 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 WDR72Q3MJ13 1102 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 FASTKD5Q7L8L6 764 aaKnown RBP23.53■■□□□ 1.36
PNKP-201ENST00000322344 IFNLR1Q8IU57 520 aaPredicted RBP23.53■■□□□ 1.36
PNKP-201ENST00000322344 CYP4X1Q8N118 509 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 COPS5Q92905 334 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 MINDY3Q9H8M7 445 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 UBN1Q9NPG3 1134 aa23.53■■□□□ 1.36
PNKP-201ENST00000322344 SNX3O60493 162 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 LRCH4O75427 683 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 DDNO94850 711 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 ZSCAN5DPP0CG00 497 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CETPP11597 493 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 RAP1GAPP47736 663 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 LRRC14Q15048 493 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CYP4F22Q6NT55 531 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 ANKRD42Q8N9B4 389 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CLMNQ96JQ2 1002 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 ASB7Q9H672 318 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 EXOC1LA0A1B0GW35 172 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 LACTBL1A8MY62 500 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 SGK1O00141 431 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 GPR25O00155 361 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 ALOX15BO15296 676 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 DNAJC8O75937 253 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 OAS1P00973 400 aaKnown RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 NFICP08651 508 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 STAG3L1P0CL83 205 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 PLCB3Q01970 1234 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 PTPN11Q06124 597 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 BBS12Q6ZW61 710 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CENPUQ71F23 418 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CDR2LQ86X02 465 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 XYLT1Q86Y38 959 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 SHCBP1Q8NEM2 672 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 JOSD2Q8TAC2 188 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 MAML1Q92585 1016 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 ZNF668Q96K58 619 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 FAM124BQ9H5Z6 455 aaPredicted RBP23.52■■□□□ 1.36
PNKP-201ENST00000322344 SYNCQ9H7C4 482 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 CYTH4Q9UIA0 394 aa23.52■■□□□ 1.36
PNKP-201ENST00000322344 TCP11X1B4DZS4 312 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms