RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 NLRP9Q7RTR0 991 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 ARMC2Q8NEN0 867 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 RDM1Q8NG50 284 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 EPS8L1Q8TE68 723 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 ALKBH8Q96BT7 664 aaKnown RBP16.11■□□□□ 0.17
GCFC2-201ENST00000321027 STAMBPL1Q96FJ0 436 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 MTMR12Q9C0I1 747 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 KIF9Q9HAQ2 790 aa16.11■□□□□ 0.17
GCFC2-201ENST00000321027 KCPQ6ZWJ8 1503 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 ATP9BO43861 1147 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 LCP1P13796 627 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 MROH9Q5TGP6 573 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 EMC1Q8N766 993 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PRELID2Q8N945 189 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PDCD6IPQ8WUM4 868 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PGM2Q96G03 612 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 FAM84AQ96KN4 292 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PXMP2Q9NR77 195 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 METTL5Q9NRN9 209 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 HEY2Q9UBP5 337 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 ORC6Q9Y5N6 252 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 H3BRJ5 948 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 FSBPO95073 299 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 STMN1P16949 149 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PCNX4Q63HM2 1172 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 CD302Q8IX05 232 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 NDUFAF2Q8N183 169 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 RIBC1Q8N443 379 aaPredicted RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 CCDC33Q8N5R6 958 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PARD3BQ8TEW8 1205 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SIK2Q9H0K1 926 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SUN2Q9UH99 717 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 DYNC1LI2O43237 492 aaPredicted RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 SLC25A27O95847 323 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 CHEK2O96017 543 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 TCF7P36402 384 aaPredicted RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 MCOLN2Q8IZK6 566 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 FSD1LQ9BXM9 530 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 LOC100653049A0A140TA62 436 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 TGFB1I1O43294 461 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 KRT34O76011 436 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PGK2P07205 417 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 VIL1P09327 827 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 OTUD4Q01804 1114 aaKnown RBP16.1■□□□□ 0.17
GCFC2-201ENST00000321027 KLC1Q07866 573 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 MORF4L2Q15014 288 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PPIL6Q8IXY8 311 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 DNAJC9Q8WXX5 260 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 MAGEB18Q96M61 343 aa16.1■□□□□ 0.17
GCFC2-201ENST00000321027 PSTPIP1O43586 416 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 DDNO94850 711 aaPredicted RBP16.09■□□□□ 0.17
GCFC2-201ENST00000321027 STX3Q13277 289 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 RNF135Q8IUD6 432 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 FBXO36Q8NEA4 188 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.09■□□□□ 0.17
GCFC2-201ENST00000321027 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 ATP6V1G2O95670 118 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 MUTP22033 750 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 CCNG2Q16589 344 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 FKBP1CQ5VVH2 108 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 CDKL3Q8IVW4 592 aaPredicted RBP16.09■□□□□ 0.17
GCFC2-201ENST00000321027 BEST2Q8NFU1 509 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
GCFC2-201ENST00000321027 ACTL9Q8TC94 416 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
GCFC2-201ENST00000321027 WDR35Q9P2L0 1181 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 KPNA7A9QM74 516 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 FSCBQ5H9T9 825 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 OR6P1Q8NGX9 317 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 CEP70Q8NHQ1 597 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 PGBD4Q96DM1 585 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 BATF3Q9NR55 127 aa16.09■□□□□ 0.17
GCFC2-201ENST00000321027 RASSF10A6NK89 507 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 VWA5AO00534 786 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 ASAP2O43150 1006 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.17
GCFC2-201ENST00000321027 RFC5P40937 340 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 TMED1Q13445 227 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 MYBPC2Q14324 1141 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 ZBTB41Q5SVQ8 909 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 ACAD11Q709F0 780 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 PWWP2AQ96N64 755 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.17
GCFC2-201ENST00000321027 WDR18Q9BV38 432 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 DCLK3Q9C098 648 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 C17orf75Q9HAS0 396 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.17
GCFC2-201ENST00000321027 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms