RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NDST4Q9H3R1 872 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 RETREG1Q9H6L5 497 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 BRD7Q9NPI1 651 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 MARK1Q9P0L2 795 aa3.53□□□□□ -1.84
SCAMP1-201ENST00000320280 OBSL1O75147 1896 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PTPRJQ12913 1337 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SMIM28A0A1B0GU29 152 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TMEM150BA6NC51 233 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CCDC85CA6NKD9 419 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 AKAP3O75969 853 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 OAZ2O95190 189 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 FERP16591 822 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CYP2C18P33260 490 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PRKCIP41743 596 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 KRT17Q04695 432 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TRPC3Q13507 836 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 MRPL58Q14197 206 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 NR1I3Q14994 352 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TCEAL1Q15170 157 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 UPP1Q16831 310 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ZC2HC1CQ53FD0 456 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 HS1BP3Q53T59 392 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 C9orf57Q5W0N0 161 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 EEF1DP3Q658K8 133 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ARHGAP17Q68EM7 881 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 FIGNL1Q6PIW4 674 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF662Q6ZS27 426 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CD163Q86VB7 1156 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ZDHHC17Q8IUH5 632 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 THEM5Q8N1Q8 247 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SLC39A11Q8N1S5 342 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CXorf38Q8TB03 319 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 STK32AQ8WU08 396 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 BADQ92934 168 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TRIM11Q96F44 468 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TNIP3Q96KP6 325 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TGS1Q96RS0 853 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CBWD1Q9BRT8 395 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 NXF3Q9H4D5 531 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CWH43Q9H720 699 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 LUC7LQ9NQ29 371 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 RAB20Q9NX57 234 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DPP3Q9NY33 737 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SPG21Q9NZD8 308 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CDH9Q9ULB4 789 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ASB3Q9Y575 518 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 LACTBL1A8MY62 500 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 MGEA5O60502 916 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SOD2P04179 222 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ALDH2P05091 517 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ITGB2P05107 769 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ATP2A2P16615 1042 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DSG1Q02413 1049 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 COL19A1Q14993 1142 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 KRT31Q15323 416 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CAMK4Q16566 473 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 NFE2Q16621 373 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 EXOC3L4Q17RC7 722 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF667Q5HYK9 610 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 MIIPQ5JXC2 388 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TMEM184AQ6ZMB5 413 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 C11orf57Q6ZUT1 292 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 APTXQ7Z2E3 356 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TRAPPC11Q7Z392 1133 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 RTN4RL1Q86UN2 441 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DCP1BQ8IZD4 617 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 MICALL1Q8N3F8 863 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 AOPEPQ8N6M6 819 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DPF3Q92784 378 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 C18orf25Q96B23 403 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CDK5RAP1Q96SZ6 601 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ACBD6Q9BR61 282 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 FAM213AQ9BRX8 229 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 STK33Q9BYT3 514 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PANK2Q9BZ23 570 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 HAPLN2Q9GZV7 340 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DNAJC25Q9H1X3 360 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ASNSD1Q9NWL6 643 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 ANKFY1Q9P2R3 1169 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 APEX2Q9UBZ4 518 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PUF60Q9UHX1 559 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 INTUQ9ULD6 942 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SSU72P8A0A1W2PR75 194 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PODXLO00592 558 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PTGESO14684 152 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 GABRDO14764 452 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SART1O43290 800 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CCP110O43303 1012 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 SORBS3O60504 671 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TUBB4AP04350 444 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 HNRNPA1P09651 372 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CTSHP09668 335 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 EPXP11678 715 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 TCF3P15923 654 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CDK11BP21127 795 aaKnown RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 DDX6P26196 483 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 CDH5P33151 784 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 PIK3CAP42336 1068 aa3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 MAGEA10P43363 369 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-201ENST00000320280 RPL34P49207 117 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms