RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SMG9Q9H0W8 520 aaKnown RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 IKZF4Q9H2S9 585 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 KIF9Q9HAQ2 790 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 HPS4Q9NQG7 708 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 TMLHEQ9NVH6 421 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 SEL1LQ9UBV2 794 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 PCDHB5Q9Y5E4 795 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 OTOL1A6NHN0 477 aaPredicted RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 EXTL3O43909 919 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 RUNX3Q13761 415 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 ZNF268Q14587 947 aaPredicted RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 TAF12Q16514 161 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 NFE2Q16621 373 aaPredicted RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 MON1AQ86VX9 555 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 SFR1Q86XK3 245 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 CXorf38Q8TB03 319 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 POMGNT1Q8WZA1 660 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 PKMYT1Q99640 499 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 TDP1Q9NUW8 608 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 ABI2Q9NYB9 513 aaPredicted RBP15.32■□□□□ 0.04
RPP40-201ENST00000319533 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 CCL26Q9Y258 94 aa15.32■□□□□ 0.04
RPP40-201ENST00000319533 TCHHQ07283 1943 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 RALGAPA1Q6GYQ0 2036 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 NOL4O94818 638 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 CSH1P0DML2 217 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 CSH2P0DML3 217 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 AVPR1AP37288 418 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 RAP1GAPP47736 663 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 CDR1P51861 262 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 LIMK1P53667 647 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 WNT7BP56706 349 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 TSPY1Q01534 308 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPP40-201ENST00000319533 PKN3Q6P5Z2 889 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 USP49Q70CQ1 688 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 CEP68Q76N32 757 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 MAB21L3Q8N8X9 362 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 C1orf127Q8N9H9 656 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 RIN3Q8TB24 985 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 SPATA18Q8TC71 538 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 GAB3Q8WWW8 586 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 SNX21Q969T3 373 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 DNAJC19Q96DA6 116 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
RPP40-201ENST00000319533 EPSTI1Q96J88 318 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 MYRFLQ96LU7 910 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 ACBD6Q9BR61 282 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 OBSL1O75147 1896 aa15.31■□□□□ 0.04
RPP40-201ENST00000319533 GDF9O60383 454 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 ATG13O75143 517 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 TADA3O75528 432 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 AKAP3O75969 853 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 GAP43P17677 238 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 GPR15P49685 360 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 AMPD2Q01433 879 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 KCNA1Q09470 495 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 PPM1JQ5JR12 505 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
RPP40-201ENST00000319533 TXNDC8Q6A555 127 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 LRRC52Q8N7C0 313 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 MRPS31Q92665 395 aaKnown RBP15.3■□□□□ 0.04
RPP40-201ENST00000319533 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 PI4K2AQ9BTU6 479 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 OLFML3Q9NRN5 406 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 UXTQ9UBK9 157 aaPredicted RBP15.3■□□□□ 0.04
RPP40-201ENST00000319533 L1RE1Q9UN81 338 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 EXOC7Q9UPT5 735 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 CHD8Q9HCK8 2581 aa15.3■□□□□ 0.04
RPP40-201ENST00000319533 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 MYMKA6NI61 221 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 TM4SF5O14894 197 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 EPN2O95208 641 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 SYT1P21579 422 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 DRD1P21728 446 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 GARTP22102 1010 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 RPL10AP62906 217 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 BFSP1Q12934 665 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 INTS6LQ5JSJ4 861 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 TRIM68Q6AZZ1 485 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 TMEM86AQ8N2M4 240 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms