RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 SPDYCQ5MJ68 293 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ARID3BQ8IVW6 561 aaPredicted RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPGR-201ENST00000318842 AGGF1Q8N302 714 aaeCLIP10.11□□□□□ -0.79
RPGR-201ENST00000318842 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ZCCHC9Q8N567 271 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 HSPH1Q92598 858 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TAAR1Q96RJ0 339 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 PPP1R16BQ96T49 567 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 EPAS1Q99814 870 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 CCDC77Q9BR77 488 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 STRA6Q9BX79 667 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TRIM4Q9C037 500 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TMEM39BQ9GZU3 492 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ETAA1Q9NY74 926 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 PI4KBQ9UBF8 816 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TBX20Q9UMR3 447 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ASTN2O75129 1339 aaPredicted RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 TXNDC9O14530 226 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 RNASEH1O60930 286 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 IL1R2P27930 398 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ALDH3A1P30838 453 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 PGM1P36871 562 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ABCG1P45844 678 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ARFIP2P53365 341 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPGR-201ENST00000318842 CRADDP78560 199 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 GK3PQ14409 553 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 AOC3Q16853 763 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 KBTBD12Q3ZCT8 623 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 VWA5B1Q5TIE3 1220 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 CWF19L1Q69YN2 538 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 C16orf46Q6P387 395 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ANO5Q75V66 913 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 RBBP8NLQ8NC74 664 aaPredicted RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 RBM15BQ8NDT2 890 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 PYROXD1Q8WU10 500 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 DCAF4Q8WV16 495 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 KIFAP3Q92845 792 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 FGD4Q96M96 766 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TSSK1BQ9BXA7 367 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 EBF3Q9H4W6 596 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 MANSC1Q9H8J5 431 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 KMT5AQ9NQR1 393 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 LGALS13Q9UHV8 139 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 LOC100653049A0A140TA62 436 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TBX3O15119 743 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 KRT34O76011 436 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 PROSCO94903 275 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 HLA-DRAP01903 254 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 NELFEP18615 380 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 GNA15P30679 374 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 RTP1P59025 263 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 STAT4Q14765 748 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TSNAXIP1Q2TAA8 658 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 KIAA0319LQ8IZA0 1049 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 CCDC89Q8N998 374 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 TMEM161BQ8NDZ6 487 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 ACTL9Q8TC94 416 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 NMD3Q96D46 503 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.11□□□□□ -0.79
RPGR-201ENST00000318842 GPATCH2LQ9NWQ4 482 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 NUB1Q9Y5A7 615 aa10.11□□□□□ -0.79
RPGR-201ENST00000318842 MRPL42Q9Y6G3 142 aaKnown RBP10.11□□□□□ -0.79
RPGR-201ENST00000318842 DNALI1O14645 258 aaPredicted RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 DHX15O43143 795 aaKnown RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 GZMAP12544 262 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 ANXA13P27216 316 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 OTUD4Q01804 1114 aaKnown RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 RASIP1Q5U651 963 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 RIPOR1Q6ZS17 1223 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 MON1BQ7L1V2 547 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 JOSD2Q8TAC2 188 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 STMN2Q93045 179 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 CFAP57Q96MR6 1250 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 SLITRK1Q96PX8 696 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 C1orf112Q9NSG2 853 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 UVRAGQ9P2Y5 699 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 TCEAL9Q9UHQ7 104 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 CCPG1Q9ULG6 757 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 A0A1B0GTW7 788 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 LPXNO60711 386 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 VNN1O95497 513 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 GGPS1O95749 300 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 CST3P01034 146 aaPredicted RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 GTF2H1P32780 548 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 TNFSF9P41273 254 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 ELK3P41970 407 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 HADHBP55084 474 aaKnown RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 RASA2Q15283 850 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 HIF1AQ16665 826 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 CDO1Q16878 200 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 TCHHL1Q5QJ38 904 aaPredicted RBP10.1□□□□□ -0.79
RPGR-201ENST00000318842 DCUN1D2Q6PH85 259 aa10.1□□□□□ -0.79
RPGR-201ENST00000318842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.1□□□□□ -0.79
RPGR-201ENST00000318842 RNF148Q8N7C7 305 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms