RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 CENPFP49454 3210 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 DDX3YO15523 660 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 TREHO43280 583 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 MTA2O94776 668 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 CYP1A2P05177 515 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 HOXA11P31270 313 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 JADE1Q6IE81 842 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 C1orf127Q8N9H9 656 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 TRIB2Q92519 343 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 TSC22D3Q99576 134 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 ZSWIM1Q9BR11 485 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
CPNE1-201ENST00000317677 POLIQ9UNA4 740 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 PCDHB2Q9Y5E7 798 aa13.82□□□□□ -0.2
CPNE1-201ENST00000317677 SMIM35A0A1B0GVV1 85 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 KCNK3O14649 394 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 IL18RAPO95256 599 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 CYP1A1P04798 512 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 TMEM191BP0C7N4 346 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 CYP2C9P11712 490 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 HSPA9P38646 679 aaKnown RBP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 ASPAP45381 313 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 MRPS25P82663 173 aaKnown RBP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 TRIM32Q13049 653 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 PPP1R7Q15435 360 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 QPCTQ16769 361 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 DCAF12L1Q5VU92 463 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 MAATS1Q7Z4T9 603 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 TMEM40Q8WWA1 233 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 CENPTQ96BT3 561 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 OSMRQ99650 979 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 YIPF3Q9GZM5 350 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 Q9Y3F1 56 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
CPNE1-201ENST00000317677 PDCD11Q14690 1871 aaKnown RBP13.81□□□□□ -0.2
CPNE1-201ENST00000317677 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SCN10AQ9Y5Y9 1956 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 NPTXRO95502 500 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CYBAP13498 195 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 HOXC8P31273 242 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CPT1AP50416 773 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 GUCY2FP51841 1108 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 RNASE9P60153 205 aaKnown RBP13.8□□□□□ -0.2
CPNE1-201ENST00000317677 PURAQ00577 322 aaKnown RBP13.8□□□□□ -0.2
CPNE1-201ENST00000317677 FSCN1Q16658 493 aaKnown RBP13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CMPK2Q5EBM0 449 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 FAM81AQ8TBF8 368 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 BTBD6Q96KE9 485 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 GOLGA6L10A6NI86 522 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CES2O00748 559 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 DRD4P21917 467 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 GNA15P30679 374 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 ITIH4Q14624 930 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF677Q86XU0 584 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 CPA5Q8WXQ8 436 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF653Q96CK0 615 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 DTNBP1Q96EV8 351 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 ANKRD36BP1Q96IX9 119 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 AP5M1Q9H0R1 490 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
CPNE1-201ENST00000317677 MROH7Q68CQ1 1323 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 TNNC2P02585 160 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 VIMP08670 466 aaKnown RBP13.79□□□□□ -0.2
CPNE1-201ENST00000317677 AKR1A1P14550 325 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 CD58P19256 250 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 RAP1GAPP47736 663 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 NOMO3P69849 1222 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 CENPCQ03188 943 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
CPNE1-201ENST00000317677 ZNF699Q32M78 642 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
CPNE1-201ENST00000317677 ARHGAP22Q7Z5H3 698 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms