RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TRIM49BA6NDI0 452 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 FAM25EA8MYX2 175 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 K7EPI3 171 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MCF2LO15068 1137 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 AQP9O43315 295 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 COBLO75128 1261 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 HAUS5O94927 633 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CSPG5O95196 566 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 IL1BP01584 269 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 FYNP06241 537 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MCM7P33993 719 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MTIF2P46199 727 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 STT3AP46977 705 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 SIK1P57059 783 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 NOP14P78316 857 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CD300CQ08708 224 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 HSPA14Q0VDF9 509 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 COASYQ13057 564 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 PDAP1Q13442 181 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 RAPGEF1Q13905 1077 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CLEC16AQ2KHT3 1053 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CDONQ4KMG0 1287 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 ELMSAN1Q6PJG2 1045 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CLVS1Q8IUQ0 354 aaPredicted RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 REM2Q8IYK8 340 aaPredicted RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CENPSQ8N2Z9 138 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 HCAR2Q8TDS4 363 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 U2AF1L4Q8WU68 220 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 BIRC8Q96P09 236 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 NUF2Q9BZD4 464 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 EPB41L4BQ9H329 900 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 SSU72Q9NP77 194 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MTRF1LQ9UGC7 380 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 LGALS13Q9UHV8 139 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 RABGAP1Q9Y3P9 1069 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MAD1L1Q9Y6D9 718 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 A8MXQ7 604 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 ICMTO60725 284 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 EEF2P13639 858 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 UQCRBP14927 111 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 ANPEPP15144 967 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 CCNCP24863 283 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 VCPP55072 806 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 KCNC4Q03721 635 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 TNIP1Q15025 636 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 DCAF6Q58WW2 860 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 C4orf22Q6V702 233 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MIER3Q7Z3K6 550 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 ELMOD1Q8N336 334 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 LZTR1Q8N653 840 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 NATD1Q8N6N6 113 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 OR6Y1Q8NGX8 325 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 TPCN2Q8NHX9 752 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 FMO2Q99518 471 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 UQCC2Q9BRT2 126 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 SENP6Q9GZR1 1112 aaPredicted RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 BLZF1Q9H2G9 400 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 PABPC3Q9H361 631 aaKnown RBP6.97□□□□□ -1.29
ZNF540-201ENST00000316433 MAN1C1Q9NR34 630 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 SLC38A7Q9NVC3 462 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 THAP1Q9NVV9 213 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 NDE1Q9NXR1 346 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 RRN3Q9NYV6 651 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 PCDHGA11Q9Y5H2 935 aa6.97□□□□□ -1.29
ZNF540-201ENST00000316433 TMEM120BA0PK00 339 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 SFI1A8K8P3 1242 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 PODXLO00592 558 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 MAGEB2O15479 319 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 BUB1O43683 1085 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 DNAJC6O75061 913 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 RPS6KA4O75676 772 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 TSPAN9O75954 239 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 FOSP01100 380 aaPredicted RBP6.96□□□□□ -1.29
ZNF540-201ENST00000316433 RPL17P18621 184 aaKnown RBP6.96□□□□□ -1.29
ZNF540-201ENST00000316433 IFNA8P32881 189 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 MAN1A1P33908 653 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 CAV1Q03135 178 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 IRF5Q13568 498 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 THOC5Q13769 683 aaKnown RBP6.96□□□□□ -1.29
ZNF540-201ENST00000316433 PDK3Q15120 406 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 FAM91A1Q658Y4 838 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 UGT2A3Q6UWM9 527 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 RASSF3Q86WH2 238 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 PDSS2Q86YH6 399 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 MMAAQ8IVH4 418 aaKnown RBP6.96□□□□□ -1.29
ZNF540-201ENST00000316433 CPSF7Q8N684 471 aaKnown RBP6.96□□□□□ -1.29
ZNF540-201ENST00000316433 GMCL1P1Q8NEA9 526 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 PEX13Q92968 403 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 SHCBP1LQ9BZQ2 653 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 GRIP2Q9C0E4 1043 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 C12orf10Q9HB07 376 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 TUFT1Q9NNX1 390 aa6.96□□□□□ -1.29
ZNF540-201ENST00000316433 SYNGAP1Q96PV0 1343 aa6.96□□□□□ -1.3
ZNF540-201ENST00000316433 ZSWIM8A7E2V4 1837 aa6.96□□□□□ -1.3
ZNF540-201ENST00000316433 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms