RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 SLC35G2Q8TBE7 412 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 MRFAP1L1Q96HT8 127 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 OMDQ99983 421 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 ASAH2Q9NR71 780 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 C3orf70A6NLC5 250 aaPredicted RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 SLITRK3O94933 977 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 ANP32DO95626 131 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 FAXCQ5TGI0 409 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 LRRC8DQ7L1W4 858 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 MAB21L3Q8N8X9 362 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CELF6Q96J87 481 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 FOPNLQ96NB1 174 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 RUNDC3BQ96NL0 473 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 XPO6Q96QU8 1125 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 SLC16A3O15427 465 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 TUBB4BP68371 445 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 ELAVL2Q12926 359 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 PTK2BQ14289 1009 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 RABGAP1LQ5R372 815 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CEP120Q8N960 986 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 RFWD2Q8NHY2 731 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 FAM71BQ8TC56 605 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 AHCYL2Q96HN2 611 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 CGRRF1Q99675 332 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 WDR18Q9BV38 432 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 TRIM54Q9BYV2 358 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 RNPEPQ9H4A4 650 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 AGPAT5Q9NUQ2 364 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTC1-201ENST00000315684 KPNA3O00505 521 aaPredicted RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 KRT14P02533 472 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 MYBL1P10243 752 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 YWHAQP27348 245 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RFX3P48380 749 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 PNKPQ96T60 521 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 BRD9Q9H8M2 597 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 DDX56Q9NY93 547 aaKnown RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 CRLS1Q9UJA2 301 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 PKP3Q9Y446 797 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 ATRNO75882 1429 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 CFLARO15519 480 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 CYTH3O43739 400 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TBC1D12O60347 775 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 UCHL3P15374 230 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 SELPP16109 830 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RTP1P59025 263 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 CCDC15Q0P6D6 951 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 STILQ15468 1287 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 ELMO2Q96JJ3 720 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TCF25Q9BQ70 676 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RAD18Q9NS91 495 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 EIF3DO15371 548 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTC1-201ENST00000315684 CHEK2O96017 543 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TAC1P20366 129 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 PBX3P40426 434 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 OXCT1P55809 520 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 PDIA2Q13087 525 aaKnown RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 HSDL1Q3SXM5 330 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 EMC1Q8N766 993 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 SNX31Q8N9S9 440 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 DRC3Q9H069 523 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 GOLPH3Q9H4A6 298 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 MLXIPLQ9NP71 852 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 BCL9LQ86UU0 1499 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RHOAP61586 193 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 FPGSQ05932 587 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 SPDYAQ5MJ70 313 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 SPATA24Q86W54 205 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 ZBED8Q8IZ13 594 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 LRRC43Q8N309 656 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 MAML1Q92585 1016 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 SENP8Q96LD8 212 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 ARHGAP10A1A4S6 786 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 B4GALT5O43286 388 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 ITGB6P18564 788 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RARRES1P49788 294 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 ARL4CP56559 192 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 DDR2Q16832 855 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TMEM63BQ5T3F8 832 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 OOSP2Q86WS3 158 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 LGI2Q8N0V4 545 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 TATDN2Q93075 761 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
CTC1-201ENST00000315684 STK33Q9BYT3 514 aa9.42□□□□□ -0.9
CTC1-201ENST00000315684 CEP41Q9BYV8 373 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms