RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 ROPN1BQ9BZX4 212 aaPredicted RBP22.3■■□□□ 1.16
LPCAT4-201ENST00000314891 ROPN1Q9HAT0 212 aaPredicted RBP22.3■■□□□ 1.16
LPCAT4-201ENST00000314891 DDX20Q9UHI6 824 aaKnown RBP22.3■■□□□ 1.16
LPCAT4-201ENST00000314891 ZNF148Q9UQR1 794 aa22.3■■□□□ 1.16
LPCAT4-201ENST00000314891 FOXO6A8MYZ6 492 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 ERBB2P04626 1255 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 PSMA2P25787 234 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 POU5F1BQ06416 359 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 KCNT1Q5JUK3 1230 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 HIBCHQ6NVY1 386 aaPredicted RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 ILDR2Q71H61 639 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 EXOC3L1Q86VI1 746 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 IFNLR1Q8IU57 520 aaPredicted RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 CENPTQ96BT3 561 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 KATNBL1Q9H079 304 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 PNMA3Q9UL41 463 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 SCN1AP35498 2009 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 C3orf70A6NLC5 250 aaPredicted RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 SIGLEC16A6NMB1 481 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 PDHXO00330 501 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 MED7O43513 233 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 CILPO75339 1184 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 LRCH4O75427 683 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 IL1R2P27930 398 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 CDR1P51861 262 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 PSMC1P62191 440 aaKnown RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 SLC25A11Q02978 314 aaKnown RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 PTPN11Q06124 597 aaPredicted RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 XYLT1Q86Y38 959 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 IPO4Q8TEX9 1081 aaKnown RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 SYT17Q9BSW7 474 aa22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 METTL5Q9NRN9 209 aaKnown RBP22.29■■□□□ 1.16
LPCAT4-201ENST00000314891 MAGEB2O15479 319 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 POLR2BP30876 1174 aaKnown RBP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 MTHFD1LQ6UB35 978 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 UPF1Q92900 1129 aaKnown RBP eCLIP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 C9orf72Q96LT7 481 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 TSPYL1Q9H0U9 437 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 ZWILCHQ9H900 591 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 ZNF408Q9H9D4 720 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 VTA1Q9NP79 307 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 SNAI1O95863 264 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 CREB1P16220 341 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 COPS2P61201 443 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 DRICH1Q6PGQ1 229 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 ALLCQ8N6M5 410 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 NLRP7Q8WX94 980 aa22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 SAE1Q9UBE0 346 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-201ENST00000314891 MICAL2O94851 1124 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 PTPN7P35236 360 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 LIG3P49916 1009 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 SPATS2Q86XZ4 545 aaKnown RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 BBOF1Q8ND07 529 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 TMEM176AQ96HP8 235 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 ASB7Q9H672 318 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 DDX56Q9NY93 547 aaKnown RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 ATXN2Q99700 1313 aaKnown RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 C5orf60A6NFR6 353 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 H3BRB1 525 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 TSPAN1O60635 241 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 DRD4P21917 467 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 ARSEP51690 589 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 CCNA1P78396 465 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 OASLQ15646 514 aaKnown RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 MARCH8Q5T0T0 291 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 TADA2BQ86TJ2 420 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 HPDLQ96IR7 371 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 SERPINB12Q96P63 405 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 ZNF317Q96PQ6 595 aaPredicted RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 TMEM121Q9BTD3 319 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 STMN4Q9H169 189 aaPredicted RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 CXCL16Q9H2A7 254 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 TUT1Q9H6E5 874 aaKnown RBP22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 SYNCQ9H7C4 482 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 AGAP1Q9UPQ3 857 aa22.27■■□□□ 1.16
LPCAT4-201ENST00000314891 A0A087WUV0 522 aaPredicted RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 RBM47A0AV96 593 aaKnown RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 CETPP11597 493 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 DYNLT1P63172 113 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 LMNB2Q03252 620 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 IFT88Q13099 833 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 TMEM132DQ14C87 1099 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 MAP1SQ66K74 1059 aaPredicted RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 C6orf89Q6UWU4 347 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 DPH6Q7L8W6 267 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 CHMP6Q96FZ7 201 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 MS4A4AQ96JQ5 239 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 PRMT1Q99873 361 aaKnown RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 BTBD19C9JJ37 291 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 M0QYV0 167 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 VCPP55072 806 aaKnown RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 PDE4CQ08493 712 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 POLNQ7Z5Q5 900 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 ARHGEF2Q92974 986 aaKnown RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 EMID1Q96A84 441 aaPredicted RBP22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 SEC16BQ96JE7 1060 aa22.26■■□□□ 1.15
LPCAT4-201ENST00000314891 RBM15Q96T37 977 aaKnown RBP eCLIP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms