RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ALG6Q9Y672 507 aa26.43■■□□□ 1.82
CDPF1-201ENST00000314567 F8W810 466 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 DDX3YO15523 660 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 DDHD2O94830 711 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 CYP3A5P20815 502 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 EPHB4P54760 987 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 NOMO2Q5JPE7 1267 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 LIN9Q5TKA1 542 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 TTC39CQ8N584 583 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 C3orf58Q8NDZ4 430 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 CPA5Q8WXQ8 436 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 TSPAN18Q96SJ8 248 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 ELAC1Q9H777 363 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 SLC38A7Q9NVC3 462 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 PCDHGC3Q9UN70 934 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 PGRMC1O00264 195 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 CEP104O60308 925 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 C1QBPQ07021 282 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 GRIK3Q13003 919 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 CLUL1Q15846 466 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 PAN2Q504Q3 1202 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 GLE1Q53GS7 698 aaKnown RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 FAM117BQ6P1L5 589 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 CC2D1AQ6P1N0 951 aaPredicted RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 ZNF518BQ9C0D4 1074 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 ARFGAP3Q9NP61 516 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 TBC1D13Q9NVG8 400 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 SMARCAL1Q9NZC9 954 aa26.42■■□□□ 1.82
CDPF1-201ENST00000314567 TTC7AQ9ULT0 858 aaPredicted RBP26.42■■□□□ 1.82
CDPF1-201ENST00000314567 FAM170AA1A519 330 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 RRP9O43818 475 aaKnown RBP26.41■■□□□ 1.82
CDPF1-201ENST00000314567 PAEPP09466 180 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 LRPAP1P30533 357 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 UBL4BQ8N7F7 174 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 CASD1Q96PB1 797 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.41■■□□□ 1.82
CDPF1-201ENST00000314567 IL23AQ9NPF7 189 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 SNX9Q9Y5X1 595 aa26.41■■□□□ 1.82
CDPF1-201ENST00000314567 PODXLO00592 558 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 INPPL1O15357 1258 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 MYO1EQ12965 1108 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 PTPROQ16827 1216 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 HASPINQ8TF76 798 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 RBM12Q9NTZ6 932 aaKnown RBP26.4■■□□□ 1.82
CDPF1-201ENST00000314567 DNAJB4Q9UDY4 337 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 FNDC1Q4ZHG4 1894 aaPredicted RBP26.4■■□□□ 1.82
CDPF1-201ENST00000314567 ATP8B1O43520 1251 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 ORC1Q13415 861 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 MESDQ14696 234 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 NPAS4Q8IUM7 802 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 ABI1Q8IZP0 508 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 LRRC52Q8N7C0 313 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 MRPL47Q9HD33 250 aaKnown RBP26.4■■□□□ 1.82
CDPF1-201ENST00000314567 ADAM22Q9P0K1 906 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 TMEM59LQ9UK28 342 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 SCINQ9Y6U3 715 aa26.4■■□□□ 1.82
CDPF1-201ENST00000314567 MED7O43513 233 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 ZRANB2O95218 330 aaKnown RBP eCLIP26.39■■□□□ 1.82
CDPF1-201ENST00000314567 CDH5P33151 784 aaPredicted RBP26.39■■□□□ 1.82
CDPF1-201ENST00000314567 LILRA4P59901 499 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 VSNL1P62760 191 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 TNNC1P63316 161 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 UPP1Q16831 310 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 ZNF394Q53GI3 561 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 PASD1Q8IV76 773 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 TMEM35BQ8NCS4 154 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 URGCPQ8TCY9 931 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 DPF3Q92784 378 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 RNF216Q9NWF9 866 aaPredicted RBP26.39■■□□□ 1.82
CDPF1-201ENST00000314567 ZNF446Q9NWS9 450 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 HMGXB4Q9UGU5 601 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 CEP83Q9Y592 693 aa26.39■■□□□ 1.82
CDPF1-201ENST00000314567 PTPRSQ13332 1948 aa26.39■■□□□ 1.81
CDPF1-201ENST00000314567 TBKBP1A7MCY6 615 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 CFHP08603 1231 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 RRM1P23921 792 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 BRD2P25440 801 aaKnown RBP26.38■■□□□ 1.81
CDPF1-201ENST00000314567 WDR5P61964 334 aaKnown RBP26.38■■□□□ 1.81
CDPF1-201ENST00000314567 RNASELQ05823 741 aaKnown RBP26.38■■□□□ 1.81
CDPF1-201ENST00000314567 FPGSQ05932 587 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 TUSC3Q13454 348 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 ZNF365Q70YC5 407 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 ABHD14A-ACY1A0A1B0GW23 586 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 ITGB1P05556 798 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 COMTP21964 271 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 TAF6P49848 677 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 C8orf74Q6P047 294 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 NAP1L3Q99457 506 aaPredicted RBP26.38■■□□□ 1.81
CDPF1-201ENST00000314567 ZSWIM1Q9BR11 485 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 C11orf70Q9BRQ4 267 aa26.38■■□□□ 1.81
CDPF1-201ENST00000314567 TMEM110-MUSTN1A8MSY1 372 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 KPNA7A9QM74 516 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 CCDC188H7C350 402 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 I3L4J1 428 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 CILPO75339 1184 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 CALB1P05937 261 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 CTNNA2P26232 953 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 CD101Q93033 1021 aa26.37■■□□□ 1.81
CDPF1-201ENST00000314567 MRPL45Q9BRJ2 306 aaKnown RBP26.37■■□□□ 1.81
CDPF1-201ENST00000314567 HTATIP2Q9BUP3 242 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms