RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 VNN2O95498 520 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
CKS2-201ENST00000314355 FCARP24071 287 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 ANXA13P27216 316 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 WEE1P30291 646 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 CYP2J2P51589 502 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 NRLP54845 237 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
CKS2-201ENST00000314355 LRRC32Q14392 662 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 INTS6LQ5JSJ4 861 aaKnown RBP13.61□□□□□ -0.23
CKS2-201ENST00000314355 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 LMBRD2Q68DH5 695 aaPredicted RBP13.61□□□□□ -0.23
CKS2-201ENST00000314355 ASCL5Q7RTU5 278 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 ADGRF2Q8IZF7 708 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 ADSSL1Q8N142 457 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
CKS2-201ENST00000314355 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 ABCB6Q9NP58 842 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 SLC39A2Q9NP94 309 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 GTF3C4Q9UKN8 822 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 L1RE1Q9UN81 338 aa13.61□□□□□ -0.23
CKS2-201ENST00000314355 LRRN2O75325 713 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 MYL1P05976 194 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 FAM163BP0C2L3 166 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 ACAT1P24752 427 aaKnown RBP13.6□□□□□ -0.23
CKS2-201ENST00000314355 CCNE1P24864 410 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
CKS2-201ENST00000314355 CDR1P51861 262 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 AP3M2P53677 418 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 TNNC1P63316 161 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 KNOP1Q1ED39 458 aaKnown RBP13.6□□□□□ -0.23
CKS2-201ENST00000314355 GAREM2Q75VX8 874 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CBWD2Q8IUF1 395 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 FUBP3Q96I24 572 aaKnown RBP eCLIP13.6□□□□□ -0.23
CKS2-201ENST00000314355 FAM126AQ9BYI3 521 aaPredicted RBP13.6□□□□□ -0.23
CKS2-201ENST00000314355 FGFBP2Q9BYJ0 223 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 AGPAT3Q9NRZ7 376 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 MTF2Q9Y483 593 aaPredicted RBP13.6□□□□□ -0.23
CKS2-201ENST00000314355 R4GN57 208 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 CACNA1HO95180 2353 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 MYH15Q9Y2K3 1946 aa13.6□□□□□ -0.23
CKS2-201ENST00000314355 NOTCH4Q99466 2003 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 ATF6P18850 670 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 GNL1P36915 607 aaPredicted RBP13.59□□□□□ -0.23
CKS2-201ENST00000314355 GRIK1P39086 918 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 PDE6CP51160 858 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 CCR3P51677 355 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 CYP4F8P98187 520 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 FCHO2Q0JRZ9 810 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 PSMD6Q15008 389 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 DGKKQ5KSL6 1271 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 EPM2AIP1Q7L775 607 aaPredicted RBP13.59□□□□□ -0.23
CKS2-201ENST00000314355 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
CKS2-201ENST00000314355 TTC9BQ8N6N2 239 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 OR6B3Q8NGW1 331 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 SYAP1Q96A49 352 aaPredicted RBP13.59□□□□□ -0.23
CKS2-201ENST00000314355 SYT15Q9BQS2 421 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
CKS2-201ENST00000314355 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
CKS2-201ENST00000314355 GABRDO14764 452 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 PDGFRBP09619 1106 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CMA1P23946 247 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CYP2F1P24903 491 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 ATICP31939 592 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 WNT7BP56706 349 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 NLRP12P59046 1061 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CYP27A1Q02318 531 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 BIRC3Q13489 604 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CUL4BQ13620 913 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 DDR2Q16832 855 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CFAP221Q4G0U5 840 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 STXBP5Q5T5C0 1151 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 POTEHQ6S545 545 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 VSTM1Q6UX27 236 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 GLIS3Q8NEA6 775 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 OR5B17Q8NGF7 314 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
CKS2-201ENST00000314355 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms