RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 VITQ6UXI7 678 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 ELMOD1Q8N336 334 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 SMARCD2Q92925 531 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 ELMO3Q96BJ8 720 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 FNBP1Q96RU3 617 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 ABCB6Q9NP58 842 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 CA14Q9ULX7 337 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 PCDHB5Q9Y5E4 795 aa15.65■□□□□ 0.1
PPP1CA-201ENST00000312989 GLULP15104 373 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 CYP2F1P24903 491 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 VIPR2P41587 438 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 LHX1P48742 406 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 STARD6P59095 220 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 PSMC1P62191 440 aaKnown RBP15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 TSPY1Q01534 308 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 MYO1EQ12965 1108 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 NFE2Q16621 373 aaPredicted RBP15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 ZACNQ401N2 412 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 SDHAF4Q5VUM1 108 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 PHLDB3Q6NSJ2 640 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 FLCNQ8NFG4 579 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 ZSCAN18Q8TBC5 510 aaPredicted RBP15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 ERCC4Q92889 916 aaPredicted RBP15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 PHOX2BQ99453 314 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 PI4K2AQ9BTU6 479 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 SDCBP2Q9H190 292 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 TMEM30AQ9NV96 361 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 FBXL21Q9UKT6 434 aa15.64■□□□□ 0.09
PPP1CA-201ENST00000312989 TULP1O00294 542 aaPredicted RBP15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 MAPK13O15264 365 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 GALR2O43603 387 aaPredicted RBP15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 NOL4O94818 638 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 PRAMEF12O95522 483 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 F11P03951 625 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 GABRR2P28476 465 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 NUBP1P53384 320 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 CYP4F8P98187 520 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 MYL7Q01449 175 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 FAM160A1Q05DH4 1040 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 GRM2Q14416 872 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 COBLL1Q53SF7 1204 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 ZC3H3Q8IXZ2 948 aaKnown RBP15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 ZNF687Q8N1G0 1237 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 TMC2Q8TDI7 906 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 MYLPFQ96A32 169 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 FUBP3Q96I24 572 aaKnown RBP eCLIP15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 SYT15Q9BQS2 421 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 DPEP3Q9H4B8 488 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 TBC1D17Q9HA65 648 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 VPS13AQ96RL7 3174 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 CACNA1HO95180 2353 aa15.63■□□□□ 0.09
PPP1CA-201ENST00000312989 GADD45BO75293 160 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 NR2F2P24468 414 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 PCSK1P29120 753 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ATICP31939 592 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 PMS1P54277 932 aaKnown RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 CACNA2D1P54289 1103 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 DDR2Q16832 855 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 WDR72Q3MJ13 1102 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 SV2AQ7L0J3 742 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ITIH5Q86UX2 942 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 RIN3Q8TB24 985 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 FAM122AQ96E09 287 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 MYRFLQ96LU7 910 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 TIGD1Q96MW7 591 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 SMYD3Q9H7B4 428 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ZFP14Q9HCL3 533 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 CDH9Q9ULB4 789 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 PCDHA5Q9Y5H7 936 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 CALUO43852 315 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 LRRN2O75325 713 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 WEE1P30291 646 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 MAGEA11P43364 429 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 AP3M2P53677 418 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ENPEPQ07075 957 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 PPP3CAQ08209 521 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 FCHO2Q0JRZ9 810 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 NCOA4Q13772 614 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 MLF2Q15773 248 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 SLC44A4Q53GD3 710 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ARID3BQ8IVW6 561 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 ELOA2Q8IYF1 753 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 CCDC105Q8IYK2 499 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 PCED1BQ96HM7 432 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 SLC46A2Q9BY10 475 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 FOXQ1Q9C009 403 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 GPR88Q9GZN0 384 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 MFSD1Q9H3U5 465 aa15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 MTF2Q9Y483 593 aaPredicted RBP15.62■□□□□ 0.09
PPP1CA-201ENST00000312989 HEPACAM2A8MVW5 462 aa15.61■□□□□ 0.09
PPP1CA-201ENST00000312989 IKBKBO14920 756 aa15.61■□□□□ 0.09
PPP1CA-201ENST00000312989 ASS1P00966 412 aaKnown RBP15.61■□□□□ 0.09
PPP1CA-201ENST00000312989 PDGFRBP09619 1106 aa15.61■□□□□ 0.09
PPP1CA-201ENST00000312989 TRIM49P0CI25 452 aa15.61■□□□□ 0.09
PPP1CA-201ENST00000312989 TRIM49CP0CI26 452 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms