RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 TCEAL1Q15170 157 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 LRRC38Q5VT99 294 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 TRIM68Q6AZZ1 485 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 GLYCTKQ8IVS8 523 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 BBS5Q8N3I7 341 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 ACTRT1Q8TDG2 376 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 RSAD2Q8WXG1 361 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 STRA6Q9BX79 667 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 VIPAS39Q9H9C1 493 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 PDE11AQ9HCR9 933 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 ANAPC7Q9UJX3 599 aa6.32□□□□□ -1.4
SEC22A-201ENST00000309934 CDK5RAP2Q96SN8 1893 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 IGKV6-21A0A0C4DH24 114 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 A8MXQ7 604 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 MCF2LO15068 1137 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PNMA6AP0CW24 399 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 DARSP14868 501 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 BCAT1P54687 386 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CYP27A1Q02318 531 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 MORN1Q5T089 497 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 KIRREL3Q8IZU9 778 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CAPNS2Q96L46 248 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TBCBQ99426 244 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CHP1Q99653 195 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PSMD3O43242 534 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CTIFO43310 598 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 ZNF862O60290 1169 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 KDM1AO60341 852 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 F2P00734 622 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 F9P00740 461 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 KRT1P04264 644 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 WEE2P0C1S8 567 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 ATF2P15336 505 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PSMA2P25787 234 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 FNTAP49354 379 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CCNHP51946 323 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 ADCY1Q08828 1119 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 BOLA3Q53S33 107 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 OR6B2Q6IFH4 312 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PEX5LQ8IYB4 626 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PPFIBP2Q8ND30 876 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 FEZF2Q8TBJ5 459 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 HNRNPLLQ8WVV9 542 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 WDR90Q96KV7 1748 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TTC25Q96NG3 672 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 LHX5Q9H2C1 402 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 STARD7Q9NQZ5 370 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PAPOLBQ9NRJ5 636 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CARD8Q9Y2G2 431 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PCDHGC5Q9Y5F6 944 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 M0QYV0 167 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 MTSS1O43312 755 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 THP07101 528 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 SLURP2P0DP57 97 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PAPOLAP51003 745 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 DNA2P51530 1060 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CASP5P51878 434 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CORO7P57737 925 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PRPSAP1Q14558 356 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 KRT72Q14CN4 511 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 NFE2Q16621 373 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 SPDYCQ5MJ68 293 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 C17orf99Q6UX52 265 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PHF13Q86YI8 300 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CDKL3Q8IVW4 592 aaPredicted RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TPCN2Q8NHX9 752 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 RNF34Q969K3 372 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 EEF2KMTQ96G04 330 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TMEM176AQ96HP8 235 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 MS4A4AQ96JQ5 239 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 TSNARE1Q96NA8 513 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 APOL6Q9BWW8 343 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CDT1Q9H211 546 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 XPNPEP1Q9NQW7 623 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 PDLIM7Q9NR12 457 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 ASIC3Q9UHC3 531 aa6.31□□□□□ -1.4
SEC22A-201ENST00000309934 CPSF3Q9UKF6 684 aaKnown RBP6.31□□□□□ -1.4
SEC22A-201ENST00000309934 BAZ2BQ9UIF8 2168 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 DICER1Q9UPY3 1922 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MTA2O94776 668 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 ASS1P00966 412 aaKnown RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 RHOXF2BP0C7M4 288 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SLC2A3P11169 496 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 SCNN1AP37088 669 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 KPNA1P52294 538 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 JAM2P57087 298 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MLLT1Q03111 559 aaPredicted RBP6.3□□□□□ -1.4
SEC22A-201ENST00000309934 GOLGA8FQ08AF8 430 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 GOLGA8DPQ0D2H9 430 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 KCNMA1Q12791 1236 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 PDK2Q15119 407 aa6.3□□□□□ -1.4
SEC22A-201ENST00000309934 MOB2Q70IA6 237 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms