RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 WDTC1Q8N5D0 677 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 C1orf131Q8NDD1 294 aaKnown RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF653Q96CK0 615 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 VWCEQ96DN2 955 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 PAWRQ96IZ0 340 aaKnown RBP7.4□□□□□ -1.23
PTCD2-201ENST00000308077 ALS2CR12Q96Q35 445 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 FTHL17Q9BXU8 183 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 PDCL3Q9H2J4 239 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 DPEP3Q9H4B8 488 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 C11orf49Q9H6J7 331 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 UBN1Q9NPG3 1134 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 CYTH4Q9UIA0 394 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 GTF3C4Q9UKN8 822 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 ATP11BQ9Y2G3 1177 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 MRFAP1Q9Y605 127 aa7.4□□□□□ -1.23
PTCD2-201ENST00000308077 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 O00370 1275 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 GFRA3O60609 400 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 LMO2P25791 158 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 NSFP46459 744 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 HADHBP55084 474 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 MMS22LQ6ZRQ5 1243 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 PHLDB2Q86SQ0 1253 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 ACOT1Q86TX2 421 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 PHF13Q86YI8 300 aaPredicted RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 RHOT2Q8IXI1 618 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 PDCL2Q8N4E4 241 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TTC39CQ8N584 583 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 C12orf29Q8N999 325 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 SEPT8Q92599 483 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 C11orf70Q9BRQ4 267 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 NT5C1AQ9BXI3 368 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TLR10Q9BXR5 811 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 CNOT8Q9UFF9 292 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 PACSIN2Q9UNF0 486 aaPredicted RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 JRKLQ9Y4A0 524 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TTC3P53804 2025 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 LTBP2Q14767 1821 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 FNDC1Q4ZHG4 1894 aaPredicted RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 F8W810 466 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 CYB561D2O14569 222 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 BUB1BO60566 1050 aaPredicted RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 SRGAP2O75044 1071 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 MTA2O94776 668 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 DDHD2O94830 711 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 MICAL2O94851 1124 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 LSM8O95777 96 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 VDRP11473 427 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 WARSP23381 471 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 RRM1P23921 792 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 RPL9P32969 192 aaKnown RBP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 AARSP49588 968 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTCD2-201ENST00000308077 GATMP50440 423 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TUSC3Q13454 348 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 PTPROQ16827 1216 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 WSCD1Q658N2 575 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 DEFB128Q7Z7B8 93 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 SLFN11Q7Z7L1 901 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 UNC93AQ86WB7 457 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF280BQ86YH2 543 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 ADGRF2Q8IZF7 708 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 APPL2Q8NEU8 664 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 OR6B3Q8NGW1 331 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 APBB2Q92870 758 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 NUP85Q9BW27 656 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM161AQ9NX61 479 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 CTTNBP2NLQ9P2B4 639 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
PTCD2-201ENST00000308077 ALPK3Q96L96 1907 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 A8MXQ7 604 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 M0QYV0 167 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 MED7O43513 233 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 HUS1O60921 280 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 ITGB1P05556 798 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 PFKMP08237 780 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 CLTBP09497 229 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 PDGFRBP09619 1106 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 MMP8P22894 467 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 GNL1P36915 607 aaPredicted RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 BRCC3P46736 316 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TERF1P54274 439 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 C1QBPQ07021 282 aaKnown RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 DSC1Q08554 894 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 CNGA2Q16280 664 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 IFI16Q16666 785 aaKnown RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 CCDC142Q17RM4 750 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 PTPN20Q4JDL3 420 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 PAN2Q504Q3 1202 aaKnown RBP7.38□□□□□ -1.23
PTCD2-201ENST00000308077 TIGD5Q53EQ6 642 aa7.38□□□□□ -1.23
PTCD2-201ENST00000308077 NOMO2Q5JPE7 1267 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms