RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NPTX2P47972 431 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 CDR1P51861 262 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 NLRP12P59046 1061 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 SCRN1Q12765 414 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 MTF1Q14872 753 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 SLC39A12Q504Y0 691 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 C2orf27AQ580R0 203 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 TAS1R3Q7RTX0 852 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 TMEM150AQ86TG1 271 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 GLIS3Q8NEA6 775 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 USP33Q8TEY7 942 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 ZBTB45Q96K62 511 aaPredicted RBP12.84□□□□□ -0.35
SMIM4-201ENST00000307106 SPACA7Q96KW9 195 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 FSCN3Q9NQT6 498 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 DUS2Q9NX74 493 aaKnown RBP12.84□□□□□ -0.35
SMIM4-201ENST00000307106 MMP17Q9ULZ9 603 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 GOLGA4Q13439 2230 aaKnown RBP12.84□□□□□ -0.35
SMIM4-201ENST00000307106 MYH10P35580 1976 aa12.83□□□□□ -0.35
SMIM4-201ENST00000307106 ALDH1A2O94788 518 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 F11P03951 625 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 CXCL8P10145 99 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ODC1P11926 461 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 P2RY2P41231 377 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 IFNAR2P48551 515 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 SEC13P55735 322 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 HNRNPDQ14103 355 aaKnown RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 NOLC1Q14978 699 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 CRY1Q16526 586 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 FRMD1Q8N878 549 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 MDM1Q8TC05 714 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 OSCP1Q8WVF1 389 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ADAMTS14Q8WXS8 1223 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ATP2A3Q93084 1043 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ZSWIM6Q9HCJ5 1215 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 UBQLN1Q9UMX0 589 aaKnown RBP12.83□□□□□ -0.36
SMIM4-201ENST00000307106 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 RAXQ9Y2V3 346 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 WNT6Q9Y6F9 365 aa12.83□□□□□ -0.36
SMIM4-201ENST00000307106 ANTXRLA6NF34 631 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 CYP3A5P20815 502 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 ITPKAP23677 461 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 GFPT1Q06210 699 aaPredicted RBP12.82□□□□□ -0.36
SMIM4-201ENST00000307106 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 DUOXA1Q1HG43 343 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 PEAR1Q5VY43 1037 aaPredicted RBP12.82□□□□□ -0.36
SMIM4-201ENST00000307106 TMEM92Q6UXU6 159 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 CCNI2Q6ZMN8 369 aaPredicted RBP12.82□□□□□ -0.36
SMIM4-201ENST00000307106 MON1AQ86VX9 555 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 MINDY1Q8N5J2 469 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 WHAMMQ8TF30 809 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 ZCWPW1Q9H0M4 648 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 PLEKHA5Q9HAU0 1116 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
SMIM4-201ENST00000307106 CYP46A1Q9Y6A2 500 aa12.82□□□□□ -0.36
SMIM4-201ENST00000307106 TMEM131Q92545 1883 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 K7EQS6 105 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 TOM1L1O75674 476 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 CD59P13987 128 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 HNRNPLP14866 589 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 MUTP22033 750 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 MCM7P33993 719 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 HOXD12P35452 270 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 LILRA4P59901 499 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 NR1H3Q13133 447 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 TRIP6Q15654 476 aaKnown RBP12.81□□□□□ -0.36
SMIM4-201ENST00000307106 ZNF77Q15935 545 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 EML3Q32P44 896 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 SPDYCQ5MJ68 293 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 HAUS3Q68CZ6 603 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 PNPLA1Q8N8W4 532 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 OR2I1PQ8NGU4 316 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 CEP76Q8TAP6 659 aa12.81□□□□□ -0.36
SMIM4-201ENST00000307106 SPPL2BQ8TCT7 592 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms