RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MSTO1Q9BUK6 570 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 UNKQ9C0B0 810 aaKnown RBP15.33■□□□□ 0.04
PTPN9-201ENST00000306726 AK5Q9Y6K8 562 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 FAM237BA0A1B0GVD1 139 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 PGM1P36871 562 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 MARSP56192 900 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 PEX6Q13608 980 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 KHDC1Q4VXA5 237 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 MROH9Q5TGP6 573 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 RPS6P62753 249 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 USP37Q86T82 979 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 GBP7Q8N8V2 638 aaPredicted RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 PIP4K2CQ8TBX8 421 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 APOL6Q9BWW8 343 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 DENND2DQ9H6A0 471 aaPredicted RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 NMRK2Q9NPI5 230 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 SMYD2Q9NRG4 433 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 K7ERI5 159 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 WDR46O15213 610 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 KIF1CO43896 1103 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 PSMD10O75832 226 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 RGS7P49802 495 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 FSTL1Q12841 308 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 CROCCP2Q86T23 111 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 RBBP8NLQ8NC74 664 aaPredicted RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 FBXO36Q8NEA4 188 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 C12orf42Q96LP6 360 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 TRIM55Q9BYV6 548 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 ZFATQ9P243 1243 aa15.32■□□□□ 0.04
PTPN9-201ENST00000306726 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
PTPN9-201ENST00000306726 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 CXCL11O14625 94 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TOP3BO95985 862 aaKnown RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 GHRP10912 638 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 MYL2P10916 166 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TUBP50607 506 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 C6orf163Q5TEZ5 329 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 C1orf146Q5VVC0 180 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 RNF148Q8N7C7 305 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TBX20Q9UMR3 447 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 SLC12A4Q9UP95 1085 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 STAM2O75886 525 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 UNC5CO95185 931 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 DSG3P32926 999 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 CDH8P55286 799 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 BAATQ14032 418 aaPredicted RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TMCO4Q5TGY1 634 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 NPNTQ6UXI9 565 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 RGS9BPQ6ZS82 235 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 NLRP4Q96MN2 994 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TSSK1BQ9BXA7 367 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 GBA2Q9HCG7 927 aaPredicted RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 RBAKQ9NYW8 714 aaPredicted RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 IL1RAPL1Q9NZN1 696 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TJP2Q9UDY2 1190 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 C5orf60A6NFR6 353 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 APRTP07741 180 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 PYGBP11216 843 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 BNIP1Q12981 228 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 GRAMD1BQ3KR37 738 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 LACTB2Q53H82 288 aaPredicted RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 ALYREFQ86V81 257 aaKnown RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 DCLK2Q8N568 766 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 ACTL9Q8TC94 416 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 SLC26A7Q8TE54 656 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 POLR3FQ9H1D9 316 aaPredicted RBP15.31■□□□□ 0.04
PTPN9-201ENST00000306726 TUFT1Q9NNX1 390 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 WASF2Q9Y6W5 498 aa15.31■□□□□ 0.04
PTPN9-201ENST00000306726 I3L4J1 428 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PTPRAP18433 802 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PPIL2Q13356 520 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
PTPN9-201ENST00000306726 ANKS1BQ7Z6G8 1248 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 CCNJLQ8IV13 435 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 C7orf31Q8N865 590 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 ARL8BQ9NVJ2 186 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 INO80B-WBP1J3KQ70 363 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 CYB561D2O14569 222 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 SPP2Q13103 211 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 ANKRD22Q5VYY1 191 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 ZNF75CPQ92670 426 aaPredicted RBP15.3■□□□□ 0.04
PTPN9-201ENST00000306726 MAGEB18Q96M61 343 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 INO80BQ9C086 356 aaPredicted RBP15.3■□□□□ 0.04
PTPN9-201ENST00000306726 DGKIO75912 1065 aa15.3■□□□□ 0.04
PTPN9-201ENST00000306726 PDE5AO76074 875 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms