RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ARHGAP18Q8N392 663 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 IPMKQ8NFU5 416 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 DDX4Q9NQI0 724 aaKnown RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 KIF17Q9P2E2 1029 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 WARS2Q9UGM6 360 aaKnown RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 VDRP11473 427 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 GZMAP12544 262 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 PRLRP16471 622 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 DDX5P17844 614 aaKnown RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 SLC29A2Q14542 456 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 COBLL1Q53SF7 1204 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 TTC30BQ8N4P2 665 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 SYTL5Q8TDW5 730 aaPredicted RBP16.63■□□□□ 0.25
USP42-201ENST00000306177 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 LSP1P33241 339 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 DDR1Q08345 913 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 DNAL1Q4LDG9 190 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 GRID1Q9ULK0 1009 aa16.63■□□□□ 0.25
USP42-201ENST00000306177 ZNF263O14978 683 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 PGK2P07205 417 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 RGS2P41220 211 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 PTGER2P43116 358 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 CLCN3P51790 818 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 PPP1R36Q96LQ0 422 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 STK25O00506 426 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 PDHA1P08559 390 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 SLC26A2P50443 739 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 MAP4P27816 1152 aaKnown RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 GEMIN4P57678 1058 aaKnown RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 TSC22D3Q99576 134 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 YY1AP1Q9H869 796 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 PPP2R3BQ9Y5P8 575 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 SYTL3Q4VX76 610 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 EARS2Q5JPH6 523 aaKnown RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 RFX8Q6ZV50 586 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 RNF180Q86T96 592 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 DDX53Q86TM3 631 aaKnown RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 CHSY1Q86X52 802 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 SLC25A41Q8N5S1 370 aa16.62■□□□□ 0.25
USP42-201ENST00000306177 MARCOQ9UEW3 520 aaPredicted RBP16.62■□□□□ 0.25
USP42-201ENST00000306177 FDFT1P37268 417 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 HARS2P49590 506 aaKnown RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 GLRA4Q5JXX5 417 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 RABGAP1LQ5R372 815 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 AGGF1Q8N302 714 aaeCLIP16.61■□□□□ 0.25
USP42-201ENST00000306177 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 SEC16BQ96JE7 1060 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 GLT1D1Q96MS3 346 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 KLK14Q9P0G3 267 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 AKAP3O75969 853 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 PYGLP06737 847 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 HOXA10P31260 410 aaPredicted RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 HSD17B3P37058 310 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 FCGRTP55899 365 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 GTF2H3Q13889 308 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 LVRNQ6Q4G3 990 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 CATSPER1Q8NEC5 780 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 MRGBPQ9NV56 204 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 MTO1Q9Y2Z2 717 aaKnown RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 CAPN6Q9Y6Q1 641 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 EPHB2P29323 1055 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 CTCFP49711 727 aaPredicted RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 LINC00523Q86TU6 105 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 STAMBPL1Q96FJ0 436 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 EIF2AQ9BY44 585 aaKnown RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 F8VZ95 297 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 M0QYT0 321 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 SYF2O95926 243 aaKnown RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 APOBEC3HQ6NTF7 200 aaKnown RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 CASKIN2Q8WXE0 1202 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
USP42-201ENST00000306177 IDI2Q9BXS1 227 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 SH3BP1Q9Y3L3 701 aa16.61■□□□□ 0.25
USP42-201ENST00000306177 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 IRF1P10914 325 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 TAL1P17542 331 aaPredicted RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 AKT1P31749 480 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PTK6Q13882 451 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 MDH1BQ5I0G3 518 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 C10orf120Q5SQS8 335 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 FBXO16Q8IX29 292 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms