RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 MAP10Q9P2G4 905 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 SLC25A13Q9UJS0 675 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 KLHL20Q9Y2M5 609 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 CYP2E1P05181 493 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 CYP4Z2PQ8N1L4 340 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 LRRC71Q8N4P6 559 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 ACAD9Q9H845 621 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PPCSQ9HAB8 311 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 INTS13Q9NVM9 706 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 TRMT6Q9UJA5 497 aaKnown RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 ZBTB1Q9Y2K1 713 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PHF2O75151 1096 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 HARS2P49590 506 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PDK1Q15118 436 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PKN2Q16513 984 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 AKIRIN2Q53H80 203 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 ARMC4Q5T2S8 1044 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 TRIQKQ629K1 86 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 HAUS6Q7Z4H7 955 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PIGUQ9H490 435 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 ZCCHC17Q9NP64 241 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 NMRK2Q9NPI5 230 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 LIMA1Q9UHB6 759 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 ASB14A6NK59 587 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PHF20L1A8MW92 1017 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 H7C0S8 307 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 SPAG6O75602 509 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 MAPK1P28482 360 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CPA2P48052 419 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 STX4Q12846 297 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 KYNUQ16719 465 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PFKFB3Q16875 520 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 OR6J1Q8NGC5 347 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PHACTR1Q9C0D0 580 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 WDR41Q9HAD4 459 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PAK5Q9P286 719 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 STX7O15400 261 aaKnown RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CYP7B1O75881 506 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 ERVK-10P10266 1014 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PIK3R1P27986 724 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CRKP46108 304 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 MAPKAPK2P49137 400 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 GRAPQ13588 217 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CHI3L2Q15782 390 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 IL17REQ8NFR9 667 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 GRAPLQ8TC17 118 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 SH3RF3Q8TEJ3 882 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 LRRC39Q96DD0 335 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 NSL1Q96IY1 281 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 KLF6Q99612 283 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 IFNA14P01570 189 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 MAGEA10P43363 369 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 COPAP53621 1224 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 FAM83EQ2M2I3 478 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 KRT74Q7RTS7 529 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 KIF2BQ8N4N8 673 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 SPATA4Q8NEY3 305 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CPA5Q8WXQ8 436 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 MCEEQ96PE7 176 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 CINPQ9BW66 212 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-201ENST00000302528 VPS33BQ9H267 617 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 KLHL3Q9UH77 587 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 MADDQ8WXG6 1647 aa10.79□□□□□ -0.68
CLIP1-201ENST00000302528 PDGFRBP09619 1106 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 FBXW10Q5XX13 1052 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 DCP1BQ8IZD4 617 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CDK20Q8IZL9 346 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CASP10Q92851 521 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 SGF29Q96ES7 293 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TRIM51Q9BSJ1 452 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 SH3GLB1Q9Y371 365 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 LOC102724159A0A0B4J2E5 919 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF839A8K0R7 811 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 P4HA2O15460 535 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CTSHP09668 335 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 GRK3P35626 688 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CCT8P50990 548 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 DSG1Q02413 1049 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 DPYDQ12882 1025 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 PWP2Q15269 919 aaKnown RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ARHGAP15Q53QZ3 475 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 FAM117BQ6P1L5 589 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 GPR101Q96P66 508 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-201ENST00000302528 CCT8L2Q96SF2 557 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
CLIP1-201ENST00000302528 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms