RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CRISPLD1Q9H336 500 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 ABHD10Q9NUJ1 306 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 ARHGAP20Q9P2F6 1191 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 CDH9Q9ULB4 789 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 ATG2AQ2TAZ0 1938 aa10.11□□□□□ -0.79
RFX3-201ENST00000302303 TRIOBPQ9H2D6 2365 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 WDR27A2RRH5 827 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 C2orf71A6NGG8 1288 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 AKR1B15C9JRZ8 316 aaPredicted RBP10.1□□□□□ -0.79
RFX3-201ENST00000302303 O00370 1275 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 C2CD2LO14523 706 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 TEX28O15482 410 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 GABBR2O75899 941 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 ABLIM3O94929 683 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CXCL14O95715 111 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 PAEPP09466 180 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 SKILP12757 684 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 KRT5P13647 590 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CYP11B1P15538 503 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 GLUD2P49448 558 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CACNA2D1P54289 1103 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 PSMD5Q16401 504 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
RFX3-201ENST00000302303 PPP1R26Q5T8A7 1209 aaPredicted RBP10.1□□□□□ -0.79
RFX3-201ENST00000302303 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CCDC186Q7Z3E2 898 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 ZNF571Q7Z3V5 609 aaPredicted RBP10.1□□□□□ -0.79
RFX3-201ENST00000302303 PPFIBP1Q86W92 1011 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 MYCBPAPQ8TBZ2 947 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 ZNF606Q8WXB4 792 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 PCED1BQ96HM7 432 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 SPAG5Q96R06 1193 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 PCDHB18PQ96TA0 734 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 SYT15Q9BQS2 421 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 SNX25Q9H3E2 840 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 FNIP2Q9P278 1114 aa10.1□□□□□ -0.79
RFX3-201ENST00000302303 CLDN5O00501 218 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 BEST1O76090 585 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 CCDC130P13994 396 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
RFX3-201ENST00000302303 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
RFX3-201ENST00000302303 OR1D2P34982 312 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 FMO1Q01740 532 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 ROR1Q01973 937 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 PTK2Q05397 1052 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 GPR17Q13304 367 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 RAB33AQ14088 237 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 SFMBT2Q5VUG0 894 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 TTC30AQ86WT1 665 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 METTL23Q86XA0 190 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 PALB2Q86YC2 1186 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 TTC39CQ8N584 583 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 TTC9BQ8N6N2 239 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 ZMIZ2Q8NF64 920 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 SLC30A5Q8TAD4 765 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 KLHL5Q96PQ7 755 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 TCF25Q9BQ70 676 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 HAUS4Q9H6D7 363 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 TLR9Q9NR96 1032 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 MRPL17Q9NRX2 175 aaKnown RBP10.09□□□□□ -0.79
RFX3-201ENST00000302303 PUF60Q9UHX1 559 aaKnown RBP10.09□□□□□ -0.79
RFX3-201ENST00000302303 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 CDY1Q9Y6F8 540 aa10.09□□□□□ -0.79
RFX3-201ENST00000302303 ARHGEF37A1IGU5 675 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 OR6C75A6NL08 312 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 H7C4K7 107 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 SEC24AO95486 1093 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 MMEP08473 750 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 VDRP11473 427 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 FERP16591 822 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 PCSK1P29120 753 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 USP8P40818 1118 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 YWHAEP62258 255 aaKnown RBP10.08□□□□□ -0.8
RFX3-201ENST00000302303 CDK17Q00537 523 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 ARID5AQ03989 594 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 KCNC3Q14003 757 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 ADGRE1Q14246 886 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 CNGA2Q16280 664 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 MDH1BQ5I0G3 518 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 ZNF280DQ6N043 979 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 TMC7Q7Z402 723 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 ADGRD2Q7Z7M1 963 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 CNGA4Q8IV77 575 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 DRC7Q8IY82 874 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 THEM5Q8N1Q8 247 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 ATAD1Q8NBU5 361 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 CYFIP2Q96F07 1278 aa10.08□□□□□ -0.8
RFX3-201ENST00000302303 HEXIM2Q96MH2 286 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms