RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IP6K2Q9UHH9 426 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 TTC7AQ9ULT0 858 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 L1RE1Q9UN81 338 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CYB561D2O14569 222 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 EOMESO95936 686 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 WARSP23381 471 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 RNASE9P60153 205 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 GRIK3Q13003 919 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 MBTPS1Q14703 1052 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 PTPN20Q4JDL3 420 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CRYBG2Q8N1P7 616 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 C12orf29Q8N999 325 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 DDX27Q96GQ7 796 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 PARD6BQ9BYG5 372 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 MIOSQ9NXC5 875 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 PCDHA3Q9Y5H8 950 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 MAN1A1P33908 653 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 CLCNKBP51801 687 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 AFF1P51825 1210 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 GSCP56915 257 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 PDCLQ13371 301 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 GOLGA7BQ2TAP0 167 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 PPP1R26Q5T8A7 1209 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 ARHGAP17Q68EM7 881 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 ZNF598Q86UK7 904 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
HERPUD1-201ENST00000300302 TCRBV5S1A1TA0A578 114 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 POMCP01189 267 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 SETSIPP0DME0 302 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 H2AFXP16104 143 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PAX3P23760 479 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 MCM3P25205 808 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 GABRB2P47870 512 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PEX5P50542 639 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 RWDD2BP57060 319 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 SNX16P57768 344 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PSMC1P62191 440 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 TMEM86AQ8N2M4 240 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 UBA3Q8TBC4 463 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 ALG3Q92685 438 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 KRT35Q92764 455 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 UROC1Q96N76 676 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 MCEEQ96PE7 176 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 CPXM1Q96SM3 734 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 TRIM7Q9C029 511 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 C9IYK1 514 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 INPPL1O15357 1258 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PDGFRBP09619 1106 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 FGFR1P11362 822 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 TUSC3Q13454 348 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 UPP1Q16831 310 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 GLE1Q53GS7 698 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 PPP1R15BQ5SWA1 713 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 SEL1L2Q5TEA6 688 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 FBXO38Q6PIJ6 1188 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 SENP8Q96LD8 212 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 FAM49BQ9NUQ9 324 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 INPP5FQ9Y2H2 1132 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 NME7Q9Y5B8 376 aa16.61■□□□□ 0.25
HERPUD1-201ENST00000300302 SIGLEC16A6NMB1 481 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 CCDC188H7C350 402 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 CAPN15O75808 1086 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 FGGP02679 453 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 KRT3P12035 628 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 LMO2P25791 158 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 PIGHQ14442 188 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 GLB1LQ6UWU2 654 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 XYLT1Q86Y38 959 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 ST7Q9NRC1 585 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 TMEM59LQ9UK28 342 aa16.6■□□□□ 0.25
HERPUD1-201ENST00000300302 GOLGA8SH3BPF8 625 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 KRIT1O00522 736 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 ERBB2P04626 1255 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 LHX1P48742 406 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 FAM189BP81408 668 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 LONRF2Q1L5Z9 754 aa16.59■□□□□ 0.25
HERPUD1-201ENST00000300302 C8orf74Q6P047 294 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms