RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CIITAP33076 1130 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 SOX10P56693 466 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 RPL7AP62424 266 aaKnown RBP11.96□□□□□ -0.49
TRUB1-201ENST00000298746 ALCAMQ13740 583 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 KBTBD2Q8IY47 623 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
TRUB1-201ENST00000298746 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
TRUB1-201ENST00000298746 FAM136AQ96C01 138 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 DTNBP1Q96EV8 351 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
TRUB1-201ENST00000298746 ECSITQ9BQ95 431 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 IMPG2Q9BZV3 1241 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 VPS11Q9H270 941 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 PCSK1NQ9UHG2 260 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 XPO7Q9UIA9 1087 aaKnown RBP11.96□□□□□ -0.49
TRUB1-201ENST00000298746 SCINQ9Y6U3 715 aa11.96□□□□□ -0.49
TRUB1-201ENST00000298746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.5
TRUB1-201ENST00000298746 LOC100653049A0A140TA62 436 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 ANKRD33BA6NCL7 494 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 TRPA1O75762 1119 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 KRT34O76011 436 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 ATP6V1B1P15313 513 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 FAAP100Q0VG06 881 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 CHI3L2Q15782 390 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 NFIL3Q16649 462 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 LIN52Q52LA3 116 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 RFX6Q8HWS3 928 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 HELQQ8TDG4 1101 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 SENP7Q9BQF6 1050 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 KCND2Q9NZV8 630 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.5
TRUB1-201ENST00000298746 SPATA31A1Q5TZJ5 1347 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 DDTLA6NHG4 134 aaPredicted RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 A6NJR5 290 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 A8MXQ7 604 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TRIM49D1C9J1S8 452 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ALOX15BO15296 676 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TM9SF1O15321 606 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TYROBPO43914 113 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 CD19P15391 556 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TCF4P15884 667 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 BTKQ06187 659 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 WDR72Q3MJ13 1102 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 FOXB2Q5VYV0 432 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TMEM179Q6ZVK1 233 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ZNF398Q8TD17 642 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TIPINQ9BVW5 301 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 APOL6Q9BWW8 343 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 WWP1Q9H0M0 922 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 DBNDD1Q9H9R9 158 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 DDX18Q9NVP1 670 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 GAKO14976 1311 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 F8VP50 259 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ECE2O60344 883 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 CST8O60676 142 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 PDE5AO76074 875 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 NCF2P19878 526 aaPredicted RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 GCAP28676 217 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 LIG4P49917 911 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 SCNN1BP51168 640 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ZNF200P98182 395 aaPredicted RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TRMT5Q32P41 509 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 GSTCDQ8NEC7 633 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 FEZF2Q8TBJ5 459 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 PPP2R3CQ969Q6 453 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 MPP4Q96JB8 637 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 PARVAQ9NVD7 372 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 NUMBLQ9Y6R0 609 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 IL1R1P14778 569 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ACOT2P49753 483 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 VCPP55072 806 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ZNF568Q3ZCX4 644 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 LGSNQ5TDP6 509 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 LPCAT4Q643R3 524 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ZCCHC23Q6ZST2 131 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 MARK2Q7KZI7 788 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 SDCCAG8Q86SQ7 713 aaPredicted RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 FAM71DQ8N9W8 422 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 ACTL9Q8TC94 416 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 SPATA16Q9BXB7 569 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 GALNT8Q9NY28 637 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 MRPL11Q9Y3B7 192 aaKnown RBP11.95□□□□□ -0.5
TRUB1-201ENST00000298746 PCDHAC2Q9Y5I4 1007 aa11.95□□□□□ -0.5
TRUB1-201ENST00000298746 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 UMODL1Q5DID0 1318 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 ITGB4P16144 1822 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms