RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SH3GL3Q99963 347 aa13.21□□□□□ -0.29
TMEM200A-201ENST00000296978 DDX50Q9BQ39 737 aaKnown RBP13.21□□□□□ -0.29
TMEM200A-201ENST00000296978 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.29
TMEM200A-201ENST00000296978 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 RGL2O15211 777 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 ASNSP08243 561 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 PYGBP11216 843 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 IVDP26440 423 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 NRLP54845 237 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 KHDC1Q4VXA5 237 aaKnown RBP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 DSTYKQ6XUX3 929 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 LRRN4Q8WUT4 740 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 SCG3Q8WXD2 468 aaKnown RBP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 JDP2Q8WYK2 163 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 LRMDAQ9H2I8 198 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 G3BP2Q9UN86 482 aaKnown RBP13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 ATP8B3O60423 1300 aa13.21□□□□□ -0.3
TMEM200A-201ENST00000296978 ENTPD3O75355 529 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 GRAP2O75791 330 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MTA2O94776 668 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 TPBGLP0DKB5 382 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 KRT3P12035 628 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MUTP22033 750 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 SERPINB6P35237 376 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 SERPINB4P48594 390 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 GCNT1Q02742 428 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MAPK6Q16659 721 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MAP4K3Q8IVH8 894 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 SYTL5Q8TDW5 730 aaPredicted RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 ARL8BQ9NVJ2 186 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 FBXO40Q9UH90 709 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 PEX11AO75192 247 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 CALB1P05937 261 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 PSAPP07602 524 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 PRKCEQ02156 737 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 BLMHQ13867 455 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 LGSNQ5TDP6 509 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 TRIM72Q6ZMU5 477 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 MAGED2Q9UNF1 606 aaPredicted RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
TMEM200A-201ENST00000296978 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 AP1G2O75843 785 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 GLRA2P23416 452 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TXNRD3NBQ6F5E7 133 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 CLNKQ7Z7G1 428 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SFNP31947 248 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 BMPR2Q13873 1038 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 ANO5Q75V66 913 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 NUDCD3Q8IVD9 361 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TEX9Q8N6V9 391 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SLITRK1Q96PX8 696 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SPDYE5A6NIY4 337 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 SMNDC1O75940 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 OAS1P00973 400 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 ICAM1P05362 532 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 APRTP07741 180 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 NOMO3P69849 1222 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 ISLR2Q6UXK2 745 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 PPIL6Q8IXY8 311 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 C4orf19Q8IY42 314 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 FGD4Q96M96 766 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 FOXP3Q9BZS1 431 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 TXNDC16Q9P2K2 825 aa13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
TMEM200A-201ENST00000296978 LGALS13Q9UHV8 139 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms