RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 YTHDF3Q7Z739 585 aaKnown RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 PRUNE1Q86TP1 453 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 MKNK1Q9BUB5 465 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 RXFP1Q9HBX9 757 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 TNS2Q63HR2 1409 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 CCDC78A2IDD5 438 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 LCP1P13796 627 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 VHLP40337 213 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 CDH6P55285 790 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 GLRA4Q5JXX5 417 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 PCMTD2Q9NV79 361 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 ITSN1Q15811 1721 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 AP1G2O75843 785 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 GHRP10912 638 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 GARSP41250 739 aaKnown RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 EIF3EP60228 445 aaKnown RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 FAM102AQ5T9C2 384 aaPredicted RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 MANSC1Q9H8J5 431 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 HMX1Q9NP08 348 aaPredicted RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 RHBDL2Q9NX52 303 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 SENP1Q9P0U3 644 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 KLHL8Q9P2G9 620 aaPredicted RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TISP43B9A030 160 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 SHOX2O60902 331 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 SETSIPP0DME0 302 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 SERPINB3P29508 390 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TMEM132DQ14C87 1099 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 KCNT1Q5JUK3 1230 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 GALNT4Q8N4A0 578 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TLK1Q9UKI8 766 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 CST8O60676 142 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TCN1P20061 433 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 SH3BGRP55822 239 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 ESRRGP62508 458 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 PTK7Q13308 1070 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 DCAF4L1Q3SXM0 396 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 CCNYL1Q8N7R7 359 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 ICA1LQ8NDH6 482 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 APPL2Q8NEU8 664 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 NSL1Q96IY1 281 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 RIT2Q99578 217 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 CHST7Q9NS84 486 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 FAM8A1Q9UBU6 413 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 IP6K2Q9UHH9 426 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 ENTPD5O75356 428 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 SUPT3HO75486 399 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 GRAP2O75791 330 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 IL1R1P14778 569 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TBXAS1P24557 533 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 SESN2P58004 480 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 RBP5P82980 135 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 ASCC2Q9H1I8 757 aaPredicted RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 XAB2Q9HCS7 855 aaKnown RBP14.04□□□□□ -0.16
HPS3-201ENST00000296051 SLCO1B3Q9NPD5 702 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 EPS15L1Q9UBC2 864 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 TJP2Q9UDY2 1190 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
HPS3-201ENST00000296051 KRT16P08779 473 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 RFC5P40937 340 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 PHEXP78562 749 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 WWP1Q9H0M0 922 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 SUPT20HL2P0C7V6 817 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 RGS7P49802 495 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 RAD51Q06609 339 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 BFSP2Q13515 415 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 CBWD6Q4V339 395 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 CBWD3Q5JTY5 395 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 CBWD5Q5RIA9 395 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 DAB2IPQ5VWQ8 1189 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 JADE1Q6IE81 842 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 CCDC33Q8N5R6 958 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 BHMTQ93088 406 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 ADA2Q9NZK5 511 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 USP20Q9Y2K6 914 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 NR2E1Q9Y466 385 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 CSDE1O75534 798 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 FNTAP49354 379 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 BCAR1P56945 870 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 IL1RL1Q01638 556 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 PPATQ06203 517 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 DYNC1I2Q13409 638 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 CD302Q8IX05 232 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 MAGEB18Q96M61 343 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 MYLK2Q9H1R3 596 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 DYRK4Q9NR20 520 aa14.03□□□□□ -0.16
HPS3-201ENST00000296051 XPO7Q9UIA9 1087 aaKnown RBP14.03□□□□□ -0.16
HPS3-201ENST00000296051 S100BP04271 92 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms