RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 CREMQ03060 361 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 LRRTM3Q86VH5 581 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 DRC7Q8IY82 874 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 MYO6Q9UM54 1294 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 LUC7L2Q9Y383 392 aaKnown RBP29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 MYBPHLA2RUH7 354 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 GFPT2O94808 682 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 CALCAP01258 141 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 CPB1P15086 417 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 CLCN1P35523 988 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 ZBED6P86452 979 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 SMYD5Q6GMV2 418 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 MRPL38Q96DV4 380 aaKnown RBP29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 ACP6Q9NPH0 428 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 GTF3C4Q9UKN8 822 aa29.53■■■□□ 2.32
CHCHD4-201ENST00000295767 NDUFV1P49821 464 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 CDR1P51861 262 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 ROR1Q01973 937 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 MDH1BQ5I0G3 518 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 C12orf29Q8N999 325 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 KLHL5Q96PQ7 755 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 TMLHEQ9NVH6 421 aa29.52■■■□□ 2.32
CHCHD4-201ENST00000295767 PAEPP09466 180 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 GOLGA8FQ08AF8 430 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 GOLGA8DPQ0D2H9 430 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 PTPROQ16827 1216 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 SLC39A12Q504Y0 691 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 E4F1Q66K89 784 aaPredicted RBP29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 FAM171BQ6P995 826 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 SPC24Q8NBT2 197 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 ZNF397Q8NF99 534 aaPredicted RBP29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 HEXIM2Q96MH2 286 aaKnown RBP29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 FAM161BQ96MY7 647 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 EMILIN2Q9BXX0 1053 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 FAM49BQ9NUQ9 324 aa29.51■■■□□ 2.31
CHCHD4-201ENST00000295767 MTCL1Q9Y4B5 1905 aaKnown RBP29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 WDR27A2RRH5 827 aa29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 TPM1P09493 284 aa29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 KRT9P35527 623 aa29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 DCP1BQ8IZD4 617 aaKnown RBP29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 MYCBPAPQ8TBZ2 947 aa29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 DNAI2Q9GZS0 605 aa29.5■■■□□ 2.31
CHCHD4-201ENST00000295767 CD19P15391 556 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 GPR17Q13304 367 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 ADGRD2Q7Z7M1 963 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 SLC47A2Q86VL8 602 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 MFAP3LO75121 409 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 ADKP55263 362 aaKnown RBP29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 ARID5AQ03989 594 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 RAB33AQ14088 237 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 SFMBT2Q5VUG0 894 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 RNF19BQ6ZMZ0 732 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 TFAP2BQ92481 460 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 MYLPFQ96A32 169 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 PCED1BQ96HM7 432 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 PGLYRP2Q96PD5 576 aa29.49■■■□□ 2.31
CHCHD4-201ENST00000295767 ADH1AP07327 375 aa29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 CCDC130P13994 396 aa29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 BRD2P25440 801 aaKnown RBP29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 GNA15P30679 374 aa29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 PTK2Q05397 1052 aa29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 ZSWIM1Q9BR11 485 aa29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 NUCKS1Q9H1E3 243 aaKnown RBP29.48■■■□□ 2.31
CHCHD4-201ENST00000295767 VDRP11473 427 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 KLRC2P26717 231 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 MAPRE1Q15691 268 aaKnown RBP29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 SGO2Q562F6 1265 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 PALB2Q86YC2 1186 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 B3GNT5Q9BYG0 378 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 AIPL1Q9NZN9 384 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 KIAA1257Q9ULG3 409 aa29.47■■■□□ 2.31
CHCHD4-201ENST00000295767 MTMR11A4FU01 709 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 AKR1B15C9JRZ8 316 aaPredicted RBP29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 CYP11B1P15538 503 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 FERP16591 822 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 BPIFB4P59827 614 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 CYP27A1Q02318 531 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 ASIC2Q16515 512 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 NFE2Q16621 373 aaPredicted RBP29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 PPP1R26Q5T8A7 1209 aaPredicted RBP29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 IRF2BP2Q7Z5L9 587 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 CNGA4Q8IV77 575 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 ZNF461Q8TAF7 563 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 EPS8L1Q8TE68 723 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 CYFIP2Q96F07 1278 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 IMPACTQ9P2X3 320 aa29.46■■■□□ 2.31
CHCHD4-201ENST00000295767 THAP12O43422 761 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 ABLIM3O94929 683 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 VNN2O95498 520 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 GPR153Q6NV75 609 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 RBM23Q86U06 439 aaKnown RBP29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 FMNL3Q8IVF7 1028 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 FUKQ8N0W3 1084 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 TC2NQ8N9U0 490 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 SLC2A14Q8TDB8 520 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 ANP32BQ92688 251 aaKnown RBP29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 SYN2Q92777 582 aaPredicted RBP29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 DNAJC7Q99615 494 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 ABHD10Q9NUJ1 306 aa29.45■■■□□ 2.31
CHCHD4-201ENST00000295767 PRRC2BQ5JSZ5 2229 aaKnown RBP29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms